Gene detail information of Glyur001224s00023144 |
Functional Annotation
| Database | Orthologs | E value | Annotation |
|---|---|---|---|
| TAIR | AT2G39170.1 | 3.00E-44 | |
| NR | XP_006589403.1 | 5.91E-134 | PREDICTED: uncharacterized protein LOC100807152 isoform X4 [Glycine max] |
| trEMBL | tr|I1LCW6|I1LCW6_SOYBN | 2.00E-134 | Uncharacterized protein {ECO:0000313|EnsemblPlants:GLYMA10G35160.8} |
Sequence
| Transcript Sequence |
|---|
| Protein Sequence |
|---|
Location information (JBrowse)
| Scaffold | Start | End | Strand |
|---|---|---|---|
| Scaffold01224 | 78630 | 81943 | - |
Gene family
| Gene family | subfamily |
|---|---|
| -- | -- |
KEGG pathway
| KO | Enzyme | Enzyme ID | pathway | mapID |
|---|---|---|---|---|
| -- | -- | -- | -- | -- |
Gene Ontology
| Not hits found. |
Pfam domain
| Protein | Pfam accession | Pfam name | Alignment start | Alignment end | E-value |
|---|---|---|---|---|---|
| Glyur001224s00023144.1 | PF10167.4 | NEP | 60 | 167 | 5.80E-27 |
Expression pattern
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR1783599 | control | 8.309 |
| SRR1783600 | control | 8.598 |
| SRR1783602 | moderate drought stress | 11.542 |
| SRR1811619 | moderate drought stress | 11.113 |
| SRA Experiment | Description | TPM |
|---|---|---|
| DRR006519 | Root Summer glycyrrhizin high producing strain | 23.368 |
| DRR006520 | Root Summer glycyrrhizin high producing strain | 23.362 |
| DRR006521 | Root Winter glycyrrhizin high producing strain | 37.298 |
| DRR006522 | Root Winter glycyrrhizin high producing strain | 36.503 |
| DRR006523 | Root Summer glycyrrhizin low producing strain | 24.625 |
| DRR006524 | Root Summer glycyrrhizin low producing strain | 24.822 |
| DRR006525 | Leaf Summer glycyrrhizin high producing strain | 27.549 |
| DRR006526 | Leaf Summer glycyrrhizin high producing strain | 27.724 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR2867873 | Salt Stress (root) | 16.943 |
| SRR2868004 | Drought Stress (root) | 20.036 |
| SRR2967015 | Control (root) | 20.971 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR9715738 | Leaf | 20.958 |
| SRR9715740 | Leaf | 32.838 |
| SRR9715741 | Leaf | 27.139 |
| SRR9715739 | Root | 1.541 |
| SRR9715742 | Root | 8.131 |
| SRR9715743 | Root | 6.392 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8749027 | MeJA induced 9h | 8.082 |
| SRR8749028 | MeJA induced 9h | 9.410 |
| SRR8749029 | MeJA induced 9h | 6.521 |
| SRR8749030 | Uninduced | 7.402 |
| SRR8749031 | Uninduced | 3.660 |
| SRR8749032 | Uninduced | 4.756 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8400026 | NaCl treatment - Root | 23.024 |
| SRR8400027 | Control - Root | 22.006 |