Gene detail information of Glyur001223s00024753 |
Functional Annotation
| Database | Orthologs | E value | Annotation |
|---|---|---|---|
| TAIR | AT5G49120.1 | 6.00E-20 | Protein of unknown function (DUF581) |
| NR | AFK37039.1 | 8.79E-46 | unknown [Lotus japonicus] |
| trEMBL | tr|I3S9U7|I3S9U7_LOTJA | 3.00E-46 | Uncharacterized protein {ECO:0000313|EMBL:AFK37039.1} |
Sequence
| Transcript Sequence |
|---|
| Protein Sequence |
|---|
Location information (JBrowse)
| Scaffold | Start | End | Strand |
|---|---|---|---|
| Scaffold01223 | 70676 | 71797 | + |
Gene family
| Gene family | subfamily |
|---|---|
| -- | -- |
KEGG pathway
| KO | Enzyme | Enzyme ID | pathway | mapID |
|---|---|---|---|---|
| -- | -- | -- | -- | -- |
Gene Ontology
| Not hits found. |
Pfam domain
| Protein | Pfam accession | Pfam name | Alignment start | Alignment end | E-value |
|---|---|---|---|---|---|
| Glyur001223s00024753.1 | PF04570.9 | DUF581 | 54 | 105 | 1.50E-22 |
Expression pattern
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR1783599 | control | 88.378 |
| SRR1783600 | control | 88.057 |
| SRR1783602 | moderate drought stress | 71.178 |
| SRR1811619 | moderate drought stress | 70.896 |
| SRA Experiment | Description | TPM |
|---|---|---|
| DRR006519 | Root Summer glycyrrhizin high producing strain | 66.774 |
| DRR006520 | Root Summer glycyrrhizin high producing strain | 66.602 |
| DRR006521 | Root Winter glycyrrhizin high producing strain | 3.533 |
| DRR006522 | Root Winter glycyrrhizin high producing strain | 3.333 |
| DRR006523 | Root Summer glycyrrhizin low producing strain | 21.603 |
| DRR006524 | Root Summer glycyrrhizin low producing strain | 21.423 |
| DRR006525 | Leaf Summer glycyrrhizin high producing strain | 1.566 |
| DRR006526 | Leaf Summer glycyrrhizin high producing strain | 1.503 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR2867873 | Salt Stress (root) | 9.194 |
| SRR2868004 | Drought Stress (root) | 2.370 |
| SRR2967015 | Control (root) | 2.987 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR9715738 | Leaf | 0.227 |
| SRR9715740 | Leaf | 0.321 |
| SRR9715741 | Leaf | 0.000 |
| SRR9715739 | Root | 4.585 |
| SRR9715742 | Root | 8.772 |
| SRR9715743 | Root | 7.460 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8749027 | MeJA induced 9h | 6.500 |
| SRR8749028 | MeJA induced 9h | 1.192 |
| SRR8749029 | MeJA induced 9h | 3.050 |
| SRR8749030 | Uninduced | 0.517 |
| SRR8749031 | Uninduced | 0.251 |
| SRR8749032 | Uninduced | 0.511 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8400026 | NaCl treatment - Root | 45.612 |
| SRR8400027 | Control - Root | 54.908 |