Gene detail information of Glyur001223s00024748 |
Functional Annotation
| Database | Orthologs | E value | Annotation |
|---|---|---|---|
| TAIR | AT5G49170.1 | 2.00E-26 | |
| NR | KEH37199.1 | 6.85E-102 | hypothetical protein MTR_2g435810 [Medicago truncatula] |
| trEMBL | tr|A0A072V5B6|A0A072V5B6_MEDTR | 3.00E-102 | Uncharacterized protein {ECO:0000313|EMBL:KEH37219.1} |
Sequence
| Transcript Sequence |
|---|
| Protein Sequence |
|---|
Location information (JBrowse)
| Scaffold | Start | End | Strand |
|---|---|---|---|
| Scaffold01223 | 40040 | 41031 | + |
Gene family
| Gene family | subfamily |
|---|---|
| -- | -- |
KEGG pathway
| KO | Enzyme | Enzyme ID | pathway | mapID |
|---|---|---|---|---|
| -- | -- | -- | -- | -- |
Gene Ontology
| Not hits found. |
Pfam domain
| Protein | Pfam accession | Pfam name | Alignment start | Alignment end | E-value |
|---|---|---|---|---|---|
| -- | -- | -- | -- | -- | -- |
Expression pattern
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR1783599 | control | 5.936 |
| SRR1783600 | control | 5.638 |
| SRR1783602 | moderate drought stress | 2.869 |
| SRR1811619 | moderate drought stress | 2.657 |
| SRA Experiment | Description | TPM |
|---|---|---|
| DRR006519 | Root Summer glycyrrhizin high producing strain | 0.889 |
| DRR006520 | Root Summer glycyrrhizin high producing strain | 1.133 |
| DRR006521 | Root Winter glycyrrhizin high producing strain | 0.000 |
| DRR006522 | Root Winter glycyrrhizin high producing strain | 0.000 |
| DRR006523 | Root Summer glycyrrhizin low producing strain | 1.421 |
| DRR006524 | Root Summer glycyrrhizin low producing strain | 1.480 |
| DRR006525 | Leaf Summer glycyrrhizin high producing strain | 3.146 |
| DRR006526 | Leaf Summer glycyrrhizin high producing strain | 3.256 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR2867873 | Salt Stress (root) | 8.204 |
| SRR2868004 | Drought Stress (root) | 7.557 |
| SRR2967015 | Control (root) | 6.926 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR9715738 | Leaf | 6.440 |
| SRR9715740 | Leaf | 1.257 |
| SRR9715741 | Leaf | 2.301 |
| SRR9715739 | Root | 16.258 |
| SRR9715742 | Root | 8.921 |
| SRR9715743 | Root | 10.093 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8749027 | MeJA induced 9h | 126.087 |
| SRR8749028 | MeJA induced 9h | 60.796 |
| SRR8749029 | MeJA induced 9h | 53.001 |
| SRR8749030 | Uninduced | 7.481 |
| SRR8749031 | Uninduced | 2.530 |
| SRR8749032 | Uninduced | 3.828 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8400026 | NaCl treatment - Root | 12.670 |
| SRR8400027 | Control - Root | 14.805 |