Gene detail information of Glyur001223s00024741 |
Functional Annotation
| Database | Orthologs | E value | Annotation |
|---|---|---|---|
| NR | KHN20788.1 | 6.00E-15 | hypothetical protein glysoja_037388, partial [Glycine soja] |
| trEMBL | tr|I1MGP1|I1MGP1_SOYBN | 2.00E-15 | Uncharacterized protein {ECO:0000313|EnsemblPlants:GLYMA15G16190.1} |
Sequence
| Transcript Sequence |
|---|
| Protein Sequence |
|---|
Location information (JBrowse)
| Scaffold | Start | End | Strand |
|---|---|---|---|
| Scaffold01223 | 2083 | 2364 | - |
Gene family
| Gene family | subfamily |
|---|---|
| -- | -- |
KEGG pathway
| KO | Enzyme | Enzyme ID | pathway | mapID |
|---|---|---|---|---|
| -- | -- | -- | -- | -- |
Gene Ontology
| Not hits found. |
Pfam domain
| Protein | Pfam accession | Pfam name | Alignment start | Alignment end | E-value |
|---|---|---|---|---|---|
| -- | -- | -- | -- | -- | -- |
Expression pattern
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR1783599 | control | 6.548 |
| SRR1783600 | control | 7.449 |
| SRR1783602 | moderate drought stress | 3.335 |
| SRR1811619 | moderate drought stress | 3.665 |
| SRA Experiment | Description | TPM |
|---|---|---|
| DRR006519 | Root Summer glycyrrhizin high producing strain | 0.543 |
| DRR006520 | Root Summer glycyrrhizin high producing strain | 0.763 |
| DRR006521 | Root Winter glycyrrhizin high producing strain | 20.885 |
| DRR006522 | Root Winter glycyrrhizin high producing strain | 21.879 |
| DRR006523 | Root Summer glycyrrhizin low producing strain | 1.353 |
| DRR006524 | Root Summer glycyrrhizin low producing strain | 1.338 |
| DRR006525 | Leaf Summer glycyrrhizin high producing strain | 46.335 |
| DRR006526 | Leaf Summer glycyrrhizin high producing strain | 45.810 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR2867873 | Salt Stress (root) | 5.170 |
| SRR2868004 | Drought Stress (root) | 21.510 |
| SRR2967015 | Control (root) | 36.463 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR9715738 | Leaf | 100.807 |
| SRR9715740 | Leaf | 106.320 |
| SRR9715741 | Leaf | 79.515 |
| SRR9715739 | Root | 1.340 |
| SRR9715742 | Root | 7.360 |
| SRR9715743 | Root | 5.476 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8749027 | MeJA induced 9h | 0.000 |
| SRR8749028 | MeJA induced 9h | 0.000 |
| SRR8749029 | MeJA induced 9h | 0.000 |
| SRR8749030 | Uninduced | 0.000 |
| SRR8749031 | Uninduced | 0.000 |
| SRR8749032 | Uninduced | 0.000 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8400026 | NaCl treatment - Root | 5.796 |
| SRR8400027 | Control - Root | 9.924 |