Gene detail information of Glyur001221s00033773 |
Functional Annotation
| Database | Orthologs | E value | Annotation |
|---|---|---|---|
| TAIR | AT5G18270.1 | 3.00E-78 | Arabidopsis NAC domain containing protein 87 |
| NR | XP_003554001.1 | 0 | PREDICTED: NAC domain-containing protein 100-like [Glycine max] |
| Swissprot | tr|Q9FLJ2|NC100_ARATH | 2.00E-93 | NAC domain-containing protein 100 |
| trEMBL | tr|K7MXS2|K7MXS2_SOYBN | 0 | Uncharacterized protein {ECO:0000313|EnsemblPlants:GLYMA19G28515.1} |
Sequence
| Transcript Sequence |
|---|
| Protein Sequence |
|---|
Location information (JBrowse)
| Scaffold | Start | End | Strand |
|---|---|---|---|
| Scaffold01221 | 36336 | 38489 | - |
Gene family
| Gene family | subfamily |
|---|---|
| Transcription Factors Family | NAC |
KEGG pathway
| KO | Enzyme | Enzyme ID | pathway | mapID |
|---|---|---|---|---|
| -- | -- | -- | -- | -- |
Gene Ontology
|
Pfam domain
| Protein | Pfam accession | Pfam name | Alignment start | Alignment end | E-value |
|---|---|---|---|---|---|
| Glyur001221s00033773.1 | PF02365.10 | NAM | 16 | 145 | 1.80E-54 |
Expression pattern
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR1783599 | control | 28.570 |
| SRR1783600 | control | 28.989 |
| SRR1783602 | moderate drought stress | 28.453 |
| SRR1811619 | moderate drought stress | 28.425 |
| SRA Experiment | Description | TPM |
|---|---|---|
| DRR006519 | Root Summer glycyrrhizin high producing strain | 61.318 |
| DRR006520 | Root Summer glycyrrhizin high producing strain | 59.954 |
| DRR006521 | Root Winter glycyrrhizin high producing strain | 11.929 |
| DRR006522 | Root Winter glycyrrhizin high producing strain | 11.502 |
| DRR006523 | Root Summer glycyrrhizin low producing strain | 92.997 |
| DRR006524 | Root Summer glycyrrhizin low producing strain | 93.656 |
| DRR006525 | Leaf Summer glycyrrhizin high producing strain | 8.509 |
| DRR006526 | Leaf Summer glycyrrhizin high producing strain | 8.642 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR2867873 | Salt Stress (root) | 58.513 |
| SRR2868004 | Drought Stress (root) | 115.183 |
| SRR2967015 | Control (root) | 98.038 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR9715738 | Leaf | 23.479 |
| SRR9715740 | Leaf | 25.481 |
| SRR9715741 | Leaf | 31.670 |
| SRR9715739 | Root | 8.065 |
| SRR9715742 | Root | 30.974 |
| SRR9715743 | Root | 24.372 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8749027 | MeJA induced 9h | 731.659 |
| SRR8749028 | MeJA induced 9h | 966.929 |
| SRR8749029 | MeJA induced 9h | 1129.289 |
| SRR8749030 | Uninduced | 668.342 |
| SRR8749031 | Uninduced | 2044.074 |
| SRR8749032 | Uninduced | 727.576 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8400026 | NaCl treatment - Root | 47.137 |
| SRR8400027 | Control - Root | 53.050 |