Gene detail information of Glyur001220s00034108 |
Functional Annotation
| Database | Orthologs | E value | Annotation |
|---|---|---|---|
| NR | XP_004504504.1 | 1.67E-09 | PREDICTED: probable cytosolic iron-sulfur protein assembly protein 1-like [Cicer arietinum] |
| trEMBL | tr|I3S576|I3S576_MEDTR | 1.00E-09 | Uncharacterized protein {ECO:0000313|EMBL:AFK35418.1} |
Sequence
| Transcript Sequence |
|---|
| Protein Sequence |
|---|
Location information (JBrowse)
| Scaffold | Start | End | Strand |
|---|---|---|---|
| Scaffold01220 | 72485 | 74310 | + |
Gene family
| Gene family | subfamily |
|---|---|
| -- | -- |
KEGG pathway
| KO | Enzyme | Enzyme ID | pathway | mapID |
|---|---|---|---|---|
| -- | -- | -- | -- | -- |
Gene Ontology
| Not hits found. |
Pfam domain
| Protein | Pfam accession | Pfam name | Alignment start | Alignment end | E-value |
|---|---|---|---|---|---|
| -- | -- | -- | -- | -- | -- |
Expression pattern
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR1783599 | control | 8.974 |
| SRR1783600 | control | 8.970 |
| SRR1783602 | moderate drought stress | 9.843 |
| SRR1811619 | moderate drought stress | 10.574 |
| SRA Experiment | Description | TPM |
|---|---|---|
| DRR006519 | Root Summer glycyrrhizin high producing strain | 18.690 |
| DRR006520 | Root Summer glycyrrhizin high producing strain | 17.345 |
| DRR006521 | Root Winter glycyrrhizin high producing strain | 2.705 |
| DRR006522 | Root Winter glycyrrhizin high producing strain | 2.180 |
| DRR006523 | Root Summer glycyrrhizin low producing strain | 74.851 |
| DRR006524 | Root Summer glycyrrhizin low producing strain | 81.182 |
| DRR006525 | Leaf Summer glycyrrhizin high producing strain | 2.076 |
| DRR006526 | Leaf Summer glycyrrhizin high producing strain | 3.219 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR2867873 | Salt Stress (root) | 2.264 |
| SRR2868004 | Drought Stress (root) | 4.303 |
| SRR2967015 | Control (root) | 6.593 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR9715738 | Leaf | 1.667 |
| SRR9715740 | Leaf | 3.289 |
| SRR9715741 | Leaf | 2.156 |
| SRR9715739 | Root | 3.567 |
| SRR9715742 | Root | 7.915 |
| SRR9715743 | Root | 5.874 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8749027 | MeJA induced 9h | 49.536 |
| SRR8749028 | MeJA induced 9h | 59.991 |
| SRR8749029 | MeJA induced 9h | 48.691 |
| SRR8749030 | Uninduced | 31.548 |
| SRR8749031 | Uninduced | 13.297 |
| SRR8749032 | Uninduced | 23.601 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8400026 | NaCl treatment - Root | 1.008 |
| SRR8400027 | Control - Root | 2.726 |