Gene detail information of Glyur001214s00026373 |
Functional Annotation
| Database | Orthologs | E value | Annotation |
|---|---|---|---|
| TAIR | AT1G29670.1 | 2.00E-136 | GDSL-like Lipase/Acylhydrolase superfamily protein |
| NR | KHN06446.1 | 0 | GDSL esterase/lipase [Glycine soja] |
| COG | YP_005376341.1 | 3.00E-18 | phospholipase/lecithinase/hemolysin [Frateuria aurantia DSM 6220] |
| Swissprot | tr|Q9C7N4|GDL15_ARATH | 2.00E-171 | GDSL esterase/lipase At1g29670 (Precursor) |
| trEMBL | tr|C6TD09|C6TD09_SOYBN | 0 | Putative uncharacterized protein {ECO:0000313|EMBL:ACU19711.1} |
Sequence
| Transcript Sequence |
|---|
| Protein Sequence |
|---|
Location information (JBrowse)
| Scaffold | Start | End | Strand |
|---|---|---|---|
| Scaffold01214 | 50091 | 53047 | + |
Gene family
| Gene family | subfamily |
|---|---|
| -- | -- |
KEGG pathway
| KO | Enzyme | Enzyme ID | pathway | mapID |
|---|---|---|---|---|
| -- | -- | -- | -- | -- |
Gene Ontology
|
Pfam domain
| Protein | Pfam accession | Pfam name | Alignment start | Alignment end | E-value |
|---|---|---|---|---|---|
| Glyur001214s00026373.1 | PF00657.17 | Lipase_GDSL | 38 | 331 | 1.60E-44 |
Expression pattern
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR1783599 | control | 0.000 |
| SRR1783600 | control | 0.000 |
| SRR1783602 | moderate drought stress | 0.000 |
| SRR1811619 | moderate drought stress | 0.000 |
| SRA Experiment | Description | TPM |
|---|---|---|
| DRR006519 | Root Summer glycyrrhizin high producing strain | 0.000 |
| DRR006520 | Root Summer glycyrrhizin high producing strain | 0.000 |
| DRR006521 | Root Winter glycyrrhizin high producing strain | 0.000 |
| DRR006522 | Root Winter glycyrrhizin high producing strain | 0.000 |
| DRR006523 | Root Summer glycyrrhizin low producing strain | 0.000 |
| DRR006524 | Root Summer glycyrrhizin low producing strain | 0.000 |
| DRR006525 | Leaf Summer glycyrrhizin high producing strain | 22.028 |
| DRR006526 | Leaf Summer glycyrrhizin high producing strain | 22.348 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR2867873 | Salt Stress (root) | 0.076 |
| SRR2868004 | Drought Stress (root) | 0.000 |
| SRR2967015 | Control (root) | 0.000 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR9715738 | Leaf | 48.478 |
| SRR9715740 | Leaf | 5.044 |
| SRR9715741 | Leaf | 11.454 |
| SRR9715739 | Root | 0.000 |
| SRR9715742 | Root | 1.985 |
| SRR9715743 | Root | 1.082 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8749027 | MeJA induced 9h | 0.122 |
| SRR8749028 | MeJA induced 9h | 0.000 |
| SRR8749029 | MeJA induced 9h | 0.100 |
| SRR8749030 | Uninduced | 0.000 |
| SRR8749031 | Uninduced | 0.000 |
| SRR8749032 | Uninduced | 0.028 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8400026 | NaCl treatment - Root | 0.012 |
| SRR8400027 | Control - Root | 4.586 |