Gene detail information of Glyur001213s00027159 |
Functional Annotation
| Database | Orthologs | E value | Annotation |
|---|---|---|---|
| TAIR | AT1G47410.2 | 8.00E-13 | |
| NR | XP_003589223.1 | 1.35E-114 | hypothetical protein MTR_1g019800 [Medicago truncatula] |
| trEMBL | tr|G7I4F7|G7I4F7_MEDTR | 5.00E-115 | Uncharacterized protein {ECO:0000313|EMBL:AES59474.1} |
Sequence
| Transcript Sequence |
|---|
| Protein Sequence |
|---|
Location information (JBrowse)
| Scaffold | Start | End | Strand |
|---|---|---|---|
| Scaffold01213 | 57438 | 58645 | - |
Gene family
| Gene family | subfamily |
|---|---|
| -- | -- |
KEGG pathway
| KO | Enzyme | Enzyme ID | pathway | mapID |
|---|---|---|---|---|
| -- | -- | -- | -- | -- |
Gene Ontology
| Not hits found. |
Pfam domain
| Protein | Pfam accession | Pfam name | Alignment start | Alignment end | E-value |
|---|---|---|---|---|---|
| -- | -- | -- | -- | -- | -- |
Expression pattern
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR1783599 | control | 5.964 |
| SRR1783600 | control | 6.031 |
| SRR1783602 | moderate drought stress | 2.058 |
| SRR1811619 | moderate drought stress | 2.051 |
| SRA Experiment | Description | TPM |
|---|---|---|
| DRR006519 | Root Summer glycyrrhizin high producing strain | 41.068 |
| DRR006520 | Root Summer glycyrrhizin high producing strain | 40.212 |
| DRR006521 | Root Winter glycyrrhizin high producing strain | 0.949 |
| DRR006522 | Root Winter glycyrrhizin high producing strain | 0.865 |
| DRR006523 | Root Summer glycyrrhizin low producing strain | 10.246 |
| DRR006524 | Root Summer glycyrrhizin low producing strain | 10.164 |
| DRR006525 | Leaf Summer glycyrrhizin high producing strain | 34.748 |
| DRR006526 | Leaf Summer glycyrrhizin high producing strain | 34.700 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR2867873 | Salt Stress (root) | 21.931 |
| SRR2868004 | Drought Stress (root) | 10.780 |
| SRR2967015 | Control (root) | 5.400 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR9715738 | Leaf | 19.158 |
| SRR9715740 | Leaf | 31.573 |
| SRR9715741 | Leaf | 34.818 |
| SRR9715739 | Root | 1.142 |
| SRR9715742 | Root | 14.941 |
| SRR9715743 | Root | 9.534 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8749027 | MeJA induced 9h | 0.578 |
| SRR8749028 | MeJA induced 9h | 0.000 |
| SRR8749029 | MeJA induced 9h | 0.389 |
| SRR8749030 | Uninduced | 0.247 |
| SRR8749031 | Uninduced | 0.264 |
| SRR8749032 | Uninduced | 0.567 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8400026 | NaCl treatment - Root | 12.910 |
| SRR8400027 | Control - Root | 14.459 |