Gene detail information of Glyur001210s00032317 |
Functional Annotation
| Database | Orthologs | E value | Annotation |
|---|---|---|---|
| TAIR | AT1G07540.1 | 3.00E-89 | TRF-like 2 |
| NR | KEH22891.1 | 0 | double-strand telomere-binding protein, putative [Medicago truncatula] |
| Swissprot | tr|Q6R0E3|TRP5_ARATH | 2.00E-110 | Telomere repeat-binding protein 5 |
| trEMBL | tr|A0A072U0H7|A0A072U0H7_MEDTR | 0 | Double-strand telomere-binding protein, putative {ECO:0000313|EMBL:KEH22891.1} |
Sequence
| Transcript Sequence |
|---|
| Protein Sequence |
|---|
Location information (JBrowse)
| Scaffold | Start | End | Strand |
|---|---|---|---|
| Scaffold01210 | 2287 | 7676 | - |
Gene family
| Gene family | subfamily |
|---|---|
| -- | -- |
KEGG pathway
| KO | Enzyme | Enzyme ID | pathway | mapID |
|---|---|---|---|---|
| -- | -- | -- | -- | -- |
Gene Ontology
|
Pfam domain
| Protein | Pfam accession | Pfam name | Alignment start | Alignment end | E-value |
|---|---|---|---|---|---|
| -- | -- | -- | -- | -- | -- |
Expression pattern
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR1783599 | control | 2.522 |
| SRR1783600 | control | 2.358 |
| SRR1783602 | moderate drought stress | 2.632 |
| SRR1811619 | moderate drought stress | 2.578 |
| SRA Experiment | Description | TPM |
|---|---|---|
| DRR006519 | Root Summer glycyrrhizin high producing strain | 3.501 |
| DRR006520 | Root Summer glycyrrhizin high producing strain | 3.743 |
| DRR006521 | Root Winter glycyrrhizin high producing strain | 1.076 |
| DRR006522 | Root Winter glycyrrhizin high producing strain | 0.977 |
| DRR006523 | Root Summer glycyrrhizin low producing strain | 3.437 |
| DRR006524 | Root Summer glycyrrhizin low producing strain | 3.174 |
| DRR006525 | Leaf Summer glycyrrhizin high producing strain | 9.344 |
| DRR006526 | Leaf Summer glycyrrhizin high producing strain | 9.061 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR2867873 | Salt Stress (root) | 3.798 |
| SRR2868004 | Drought Stress (root) | 4.886 |
| SRR2967015 | Control (root) | 5.218 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR9715738 | Leaf | 9.495 |
| SRR9715740 | Leaf | 12.980 |
| SRR9715741 | Leaf | 7.150 |
| SRR9715739 | Root | 0.379 |
| SRR9715742 | Root | 1.868 |
| SRR9715743 | Root | 1.752 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8749027 | MeJA induced 9h | 0.825 |
| SRR8749028 | MeJA induced 9h | 0.555 |
| SRR8749029 | MeJA induced 9h | 0.439 |
| SRR8749030 | Uninduced | 0.283 |
| SRR8749031 | Uninduced | 0.192 |
| SRR8749032 | Uninduced | 0.259 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8400026 | NaCl treatment - Root | 6.184 |
| SRR8400027 | Control - Root | 5.286 |