Gene detail information of Glyur001207s00025871 |
Functional Annotation
| Database | Orthologs | E value | Annotation |
|---|---|---|---|
| TAIR | AT2G34860.2 | 1.00E-47 | DnaJ/Hsp40 cysteine-rich domain superfamily protein |
| NR | XP_007142664.1 | 8.98E-84 | hypothetical protein PHAVU_007G006200g [Phaseolus vulgaris] |
| trEMBL | tr|V7BCQ6|V7BCQ6_PHAVU | 3.00E-84 | Uncharacterized protein {ECO:0000313|EMBL:ESW14658.1} |
Sequence
| Transcript Sequence |
|---|
| Protein Sequence |
|---|
Location information (JBrowse)
| Scaffold | Start | End | Strand |
|---|---|---|---|
| Scaffold01207 | 67907 | 70634 | - |
Gene family
| Gene family | subfamily |
|---|---|
| -- | -- |
KEGG pathway
| KO | Enzyme | Enzyme ID | pathway | mapID |
|---|---|---|---|---|
| -- | -- | -- | -- | -- |
Gene Ontology
|
Pfam domain
| Protein | Pfam accession | Pfam name | Alignment start | Alignment end | E-value |
|---|---|---|---|---|---|
| -- | -- | -- | -- | -- | -- |
Expression pattern
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR1783599 | control | 3.053 |
| SRR1783600 | control | 3.066 |
| SRR1783602 | moderate drought stress | 3.664 |
| SRR1811619 | moderate drought stress | 3.551 |
| SRA Experiment | Description | TPM |
|---|---|---|
| DRR006519 | Root Summer glycyrrhizin high producing strain | 6.846 |
| DRR006520 | Root Summer glycyrrhizin high producing strain | 7.020 |
| DRR006521 | Root Winter glycyrrhizin high producing strain | 2.724 |
| DRR006522 | Root Winter glycyrrhizin high producing strain | 2.458 |
| DRR006523 | Root Summer glycyrrhizin low producing strain | 5.066 |
| DRR006524 | Root Summer glycyrrhizin low producing strain | 4.841 |
| DRR006525 | Leaf Summer glycyrrhizin high producing strain | 80.119 |
| DRR006526 | Leaf Summer glycyrrhizin high producing strain | 79.273 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR2867873 | Salt Stress (root) | 5.014 |
| SRR2868004 | Drought Stress (root) | 5.446 |
| SRR2967015 | Control (root) | 6.913 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR9715738 | Leaf | 57.122 |
| SRR9715740 | Leaf | 117.581 |
| SRR9715741 | Leaf | 36.314 |
| SRR9715739 | Root | 4.509 |
| SRR9715742 | Root | 3.215 |
| SRR9715743 | Root | 3.321 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8749027 | MeJA induced 9h | 4.826 |
| SRR8749028 | MeJA induced 9h | 1.936 |
| SRR8749029 | MeJA induced 9h | 2.680 |
| SRR8749030 | Uninduced | 0.522 |
| SRR8749031 | Uninduced | 0.149 |
| SRR8749032 | Uninduced | 0.554 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8400026 | NaCl treatment - Root | 8.393 |
| SRR8400027 | Control - Root | 8.828 |