Gene detail information of Glyur001207s00025864 |
Functional Annotation
| Database | Orthologs | E value | Annotation |
|---|---|---|---|
| TAIR | AT5G56250.2 | 5.00E-08 | hapless 8 |
| NR | XP_003592790.1 | 2.40E-69 | hypothetical protein MTR_1g116100 [Medicago truncatula] |
| trEMBL | tr|K7N5E4|K7N5E4_SOYBN | 9.00E-69 | Uncharacterized protein {ECO:0000313|EnsemblPlants:GLYMA20G38705.1} |
Sequence
| Transcript Sequence |
|---|
| Protein Sequence |
|---|
Location information (JBrowse)
| Scaffold | Start | End | Strand |
|---|---|---|---|
| Scaffold01207 | 39236 | 40857 | + |
Gene family
| Gene family | subfamily |
|---|---|
| -- | -- |
KEGG pathway
| KO | Enzyme | Enzyme ID | pathway | mapID |
|---|---|---|---|---|
| -- | -- | -- | -- | -- |
Gene Ontology
| Not hits found. |
Pfam domain
| Protein | Pfam accession | Pfam name | Alignment start | Alignment end | E-value |
|---|---|---|---|---|---|
| -- | -- | -- | -- | -- | -- |
Expression pattern
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR1783599 | control | 1.617 |
| SRR1783600 | control | 1.631 |
| SRR1783602 | moderate drought stress | 1.841 |
| SRR1811619 | moderate drought stress | 1.830 |
| SRA Experiment | Description | TPM |
|---|---|---|
| DRR006519 | Root Summer glycyrrhizin high producing strain | 3.696 |
| DRR006520 | Root Summer glycyrrhizin high producing strain | 3.658 |
| DRR006521 | Root Winter glycyrrhizin high producing strain | 0.420 |
| DRR006522 | Root Winter glycyrrhizin high producing strain | 0.411 |
| DRR006523 | Root Summer glycyrrhizin low producing strain | 4.467 |
| DRR006524 | Root Summer glycyrrhizin low producing strain | 4.298 |
| DRR006525 | Leaf Summer glycyrrhizin high producing strain | 2.465 |
| DRR006526 | Leaf Summer glycyrrhizin high producing strain | 2.544 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR2867873 | Salt Stress (root) | 1.195 |
| SRR2868004 | Drought Stress (root) | 1.530 |
| SRR2967015 | Control (root) | 1.123 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR9715738 | Leaf | 0.495 |
| SRR9715740 | Leaf | 2.357 |
| SRR9715741 | Leaf | 1.510 |
| SRR9715739 | Root | 0.071 |
| SRR9715742 | Root | 1.135 |
| SRR9715743 | Root | 0.585 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8749027 | MeJA induced 9h | 0.471 |
| SRR8749028 | MeJA induced 9h | 0.127 |
| SRR8749029 | MeJA induced 9h | 0.058 |
| SRR8749030 | Uninduced | 0.269 |
| SRR8749031 | Uninduced | 0.073 |
| SRR8749032 | Uninduced | 0.216 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8400026 | NaCl treatment - Root | 2.447 |
| SRR8400027 | Control - Root | 1.853 |