Gene detail information of Glyur001207s00025862 |
Functional Annotation
| Database | Orthologs | E value | Annotation |
|---|---|---|---|
| TAIR | AT3G55060.1 | 7.00E-165 | |
| NR | XP_004497351.1 | 0 | PREDICTED: centromere protein F-like isoform X1 [Cicer arietinum] |
| trEMBL | tr|V7BA41|V7BA41_PHAVU | 0 | Uncharacterized protein {ECO:0000313|EMBL:ESW14669.1} |
Sequence
| Transcript Sequence |
|---|
| Protein Sequence |
|---|
Location information (JBrowse)
| Scaffold | Start | End | Strand |
|---|---|---|---|
| Scaffold01207 | 24023 | 27343 | + |
Gene family
| Gene family | subfamily |
|---|---|
| -- | -- |
KEGG pathway
| KO | Enzyme | Enzyme ID | pathway | mapID |
|---|---|---|---|---|
| -- | -- | -- | -- | -- |
Gene Ontology
| Not hits found. |
Pfam domain
| Protein | Pfam accession | Pfam name | Alignment start | Alignment end | E-value |
|---|---|---|---|---|---|
| -- | -- | -- | -- | -- | -- |
Expression pattern
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR1783599 | control | 1.055 |
| SRR1783600 | control | 1.049 |
| SRR1783602 | moderate drought stress | 0.919 |
| SRR1811619 | moderate drought stress | 0.944 |
| SRA Experiment | Description | TPM |
|---|---|---|
| DRR006519 | Root Summer glycyrrhizin high producing strain | 3.329 |
| DRR006520 | Root Summer glycyrrhizin high producing strain | 3.274 |
| DRR006521 | Root Winter glycyrrhizin high producing strain | 1.224 |
| DRR006522 | Root Winter glycyrrhizin high producing strain | 1.186 |
| DRR006523 | Root Summer glycyrrhizin low producing strain | 3.706 |
| DRR006524 | Root Summer glycyrrhizin low producing strain | 3.706 |
| DRR006525 | Leaf Summer glycyrrhizin high producing strain | 1.274 |
| DRR006526 | Leaf Summer glycyrrhizin high producing strain | 1.266 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR2867873 | Salt Stress (root) | 6.666 |
| SRR2868004 | Drought Stress (root) | 8.298 |
| SRR2967015 | Control (root) | 8.996 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR9715738 | Leaf | 1.483 |
| SRR9715740 | Leaf | 1.787 |
| SRR9715741 | Leaf | 1.726 |
| SRR9715739 | Root | 0.236 |
| SRR9715742 | Root | 1.018 |
| SRR9715743 | Root | 0.741 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8749027 | MeJA induced 9h | 10.843 |
| SRR8749028 | MeJA induced 9h | 12.623 |
| SRR8749029 | MeJA induced 9h | 5.843 |
| SRR8749030 | Uninduced | 14.034 |
| SRR8749031 | Uninduced | 9.544 |
| SRR8749032 | Uninduced | 3.983 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8400026 | NaCl treatment - Root | 5.593 |
| SRR8400027 | Control - Root | 5.978 |