Gene detail information of Glyur001205s00030680 |
Functional Annotation
| Database | Orthologs | E value | Annotation |
|---|---|---|---|
| TAIR | AT1G71950.1 | 1.00E-32 | Proteinase inhibitor, propeptide |
| NR | XP_007145524.1 | 2.77E-57 | hypothetical protein PHAVU_007G245700g [Phaseolus vulgaris] |
| Swissprot | tr|Q9MAP7|SBT35_ARATH | 6.00E-11 | Subtilisin-like protease SBT3.5 {ECO:0000303|PubMed:16193095} (Precursor) |
| trEMBL | tr|V7BKG0|V7BKG0_PHAVU | 1.00E-57 | Uncharacterized protein {ECO:0000313|EMBL:ESW17518.1} |
Sequence
| Transcript Sequence |
|---|
| Protein Sequence |
|---|
Location information (JBrowse)
| Scaffold | Start | End | Strand |
|---|---|---|---|
| Scaffold01205 | 57953 | 61308 | + |
Gene family
| Gene family | subfamily |
|---|---|
| -- | -- |
KEGG pathway
| KO | Enzyme | Enzyme ID | pathway | mapID |
|---|---|---|---|---|
| -- | -- | -- | -- | -- |
Gene Ontology
| Not hits found. |
Pfam domain
| Protein | Pfam accession | Pfam name | Alignment start | Alignment end | E-value |
|---|---|---|---|---|---|
| Glyur001205s00030680.1 | PF05922.11 | Inhibitor_I9 | 52 | 128 | 1.00E-14 |
Expression pattern
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR1783599 | control | 327.876 |
| SRR1783600 | control | 326.765 |
| SRR1783602 | moderate drought stress | 349.583 |
| SRR1811619 | moderate drought stress | 348.379 |
| SRA Experiment | Description | TPM |
|---|---|---|
| DRR006519 | Root Summer glycyrrhizin high producing strain | 304.152 |
| DRR006520 | Root Summer glycyrrhizin high producing strain | 301.538 |
| DRR006521 | Root Winter glycyrrhizin high producing strain | 873.683 |
| DRR006522 | Root Winter glycyrrhizin high producing strain | 849.860 |
| DRR006523 | Root Summer glycyrrhizin low producing strain | 296.070 |
| DRR006524 | Root Summer glycyrrhizin low producing strain | 295.286 |
| DRR006525 | Leaf Summer glycyrrhizin high producing strain | 265.660 |
| DRR006526 | Leaf Summer glycyrrhizin high producing strain | 264.050 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR2867873 | Salt Stress (root) | 111.476 |
| SRR2868004 | Drought Stress (root) | 126.753 |
| SRR2967015 | Control (root) | 124.708 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR9715738 | Leaf | 129.390 |
| SRR9715740 | Leaf | 162.896 |
| SRR9715741 | Leaf | 136.628 |
| SRR9715739 | Root | 124.462 |
| SRR9715742 | Root | 112.964 |
| SRR9715743 | Root | 101.573 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8749027 | MeJA induced 9h | 84.462 |
| SRR8749028 | MeJA induced 9h | 116.330 |
| SRR8749029 | MeJA induced 9h | 106.646 |
| SRR8749030 | Uninduced | 115.752 |
| SRR8749031 | Uninduced | 110.027 |
| SRR8749032 | Uninduced | 115.858 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8400026 | NaCl treatment - Root | 171.183 |
| SRR8400027 | Control - Root | 160.464 |