Gene detail information of Glyur001204s00024987 |
Functional Annotation
| Database | Orthologs | E value | Annotation |
|---|---|---|---|
| TAIR | AT3G10185.1 | 1.00E-15 | Gibberellin-regulated family protein |
| NR | XP_004493436.1 | 4.53E-52 | PREDICTED: protein GAST1-like [Cicer arietinum] |
| Swissprot | tr|P27057|GAST1_SOLLC | 2.00E-36 | Protein GAST1 (Precursor) |
| trEMBL | tr|Q2HRH3|Q2HRH3_MEDTR | 7.00E-50 | Gibberellin regulated protein {ECO:0000313|EMBL:ABD33300.1} |
Sequence
| Transcript Sequence |
|---|
| Protein Sequence |
|---|
Location information (JBrowse)
| Scaffold | Start | End | Strand |
|---|---|---|---|
| Scaffold01204 | 8250 | 10507 | - |
Gene family
| Gene family | subfamily |
|---|---|
| -- | -- |
KEGG pathway
| KO | Enzyme | Enzyme ID | pathway | mapID |
|---|---|---|---|---|
| -- | -- | -- | -- | -- |
Gene Ontology
| Not hits found. |
Pfam domain
| Protein | Pfam accession | Pfam name | Alignment start | Alignment end | E-value |
|---|---|---|---|---|---|
| Glyur001204s00024987.1 | PF02704.9 | GASA | 53 | 112 | 2.00E-25 |
Expression pattern
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR1783599 | control | 13.983 |
| SRR1783600 | control | 13.687 |
| SRR1783602 | moderate drought stress | 4.543 |
| SRR1811619 | moderate drought stress | 4.319 |
| SRA Experiment | Description | TPM |
|---|---|---|
| DRR006519 | Root Summer glycyrrhizin high producing strain | 0.302 |
| DRR006520 | Root Summer glycyrrhizin high producing strain | 0.299 |
| DRR006521 | Root Winter glycyrrhizin high producing strain | 0.312 |
| DRR006522 | Root Winter glycyrrhizin high producing strain | 0.457 |
| DRR006523 | Root Summer glycyrrhizin low producing strain | 13.424 |
| DRR006524 | Root Summer glycyrrhizin low producing strain | 13.876 |
| DRR006525 | Leaf Summer glycyrrhizin high producing strain | 0.000 |
| DRR006526 | Leaf Summer glycyrrhizin high producing strain | 0.000 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR2867873 | Salt Stress (root) | 7.620 |
| SRR2868004 | Drought Stress (root) | 1.500 |
| SRR2967015 | Control (root) | 1.331 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR9715738 | Leaf | 0.093 |
| SRR9715740 | Leaf | 0.000 |
| SRR9715741 | Leaf | 0.000 |
| SRR9715739 | Root | 22.818 |
| SRR9715742 | Root | 9.787 |
| SRR9715743 | Root | 12.189 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8749027 | MeJA induced 9h | 0.000 |
| SRR8749028 | MeJA induced 9h | 0.000 |
| SRR8749029 | MeJA induced 9h | 0.000 |
| SRR8749030 | Uninduced | 0.000 |
| SRR8749031 | Uninduced | 0.000 |
| SRR8749032 | Uninduced | 0.000 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8400026 | NaCl treatment - Root | 248.031 |
| SRR8400027 | Control - Root | 271.394 |