Gene detail information of Glyur001203s00034507 |
Functional Annotation
| Database | Orthologs | E value | Annotation |
|---|---|---|---|
| TAIR | AT2G44930.1 | 4.00E-47 | Plant protein of unknown function (DUF247) |
| NR | KEH17777.1 | 0 | DUF247 domain protein [Medicago truncatula] |
| Swissprot | tr|Q9SD53|Y3720_ARATH | 8.00E-33 | UPF0481 protein At3g47200 |
| trEMBL | tr|A0A072TK14|A0A072TK14_MEDTR | 0 | DUF247 domain protein {ECO:0000313|EMBL:KEH17777.1} |
Sequence
| Transcript Sequence |
|---|
| Protein Sequence |
|---|
Location information (JBrowse)
| Scaffold | Start | End | Strand |
|---|---|---|---|
| Scaffold01203 | 8 | 6978 | - |
Gene family
| Gene family | subfamily |
|---|---|
| -- | -- |
KEGG pathway
| KO | Enzyme | Enzyme ID | pathway | mapID |
|---|---|---|---|---|
| -- | -- | -- | -- | -- |
Gene Ontology
| Not hits found. |
Pfam domain
| Protein | Pfam accession | Pfam name | Alignment start | Alignment end | E-value |
|---|---|---|---|---|---|
| Glyur001203s00034507.1 | PF03140.10 | DUF247 | 40 | 447 | 6.20E-98 |
Expression pattern
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR1783599 | control | 0.035 |
| SRR1783600 | control | 0.056 |
| SRR1783602 | moderate drought stress | 0.499 |
| SRR1811619 | moderate drought stress | 0.567 |
| SRA Experiment | Description | TPM |
|---|---|---|
| DRR006519 | Root Summer glycyrrhizin high producing strain | 0.042 |
| DRR006520 | Root Summer glycyrrhizin high producing strain | 0.021 |
| DRR006521 | Root Winter glycyrrhizin high producing strain | 0.000 |
| DRR006522 | Root Winter glycyrrhizin high producing strain | 0.042 |
| DRR006523 | Root Summer glycyrrhizin low producing strain | 0.106 |
| DRR006524 | Root Summer glycyrrhizin low producing strain | 0.129 |
| DRR006525 | Leaf Summer glycyrrhizin high producing strain | 15.214 |
| DRR006526 | Leaf Summer glycyrrhizin high producing strain | 15.068 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR2867873 | Salt Stress (root) | 0.354 |
| SRR2868004 | Drought Stress (root) | 0.316 |
| SRR2967015 | Control (root) | 0.361 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR9715738 | Leaf | 0.792 |
| SRR9715740 | Leaf | 0.049 |
| SRR9715741 | Leaf | 0.150 |
| SRR9715739 | Root | 0.000 |
| SRR9715742 | Root | 0.131 |
| SRR9715743 | Root | 0.237 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8749027 | MeJA induced 9h | 0.155 |
| SRR8749028 | MeJA induced 9h | 0.065 |
| SRR8749029 | MeJA induced 9h | 0.047 |
| SRR8749030 | Uninduced | 0.074 |
| SRR8749031 | Uninduced | 0.008 |
| SRR8749032 | Uninduced | 0.087 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8400026 | NaCl treatment - Root | 0.069 |
| SRR8400027 | Control - Root | 0.092 |