Gene detail

Gene detail information of Glyur001201s00028275

Functional Annotation

Database	Orthologs	E value	Annotation
TAIR	AT2G42590.2	7.00E-115	general regulatory factor 9
NR	XP_004487160.1	0	PREDICTED: 14-3-3-like protein B-like isoform X1 [Cicer arietinum]
Swissprot	tr\|Q96453\|1433D_SOYBN	0	14-3-3-like protein D
trEMBL	tr\|E1U3Z1\|E1U3Z1_CICAR	0	14-3-3 {ECO:0000313\|EMBL:ACQ45020.1}

Sequence

Transcript Sequence

>Glyur001201s00028275.1
TCATCATCAAGTAGGACCAAAGAGATAAAATAAGGAAAAGACAGGGACTTATGTGACATTTCATTCCCCCCACTCTTTTCTACAGAACCTCGAGCACGAAGCAACACAGAGTGAGTGAGAGAGATAGAGTCAGACATAGAGAGAGAAAGAGAGAGAGAGCGAGAGGGATTTCCGCAATTCGCAAACCCTAATTTCGAAGAGATCGGGTGATGGCTGTCTCCAAGGATCGCGAGAACTTCGTCTACATCGCCAAGCTCGCCGAGCAGGCCGAGCGATACGAAGAGATGGTGGATTCAATGAAGAAGGTTGCAAATCTAGATGTTGAACTGACTGTTGAAGAGCGAAATTTGCTGTCTGTTGGTTATAAGAATGTGATTGGTGCTCGGAGAGCATCGTGGAGGATCCTCTCTTCCATAGAGCAAAAGGAAGAAACAAAAGGGAATGAAGTAAATGTGAAACGGATTAAGGAGTATAGGCAGAAGGTTGAATCAGAGCTCTCAGACATCTGTAACGATGTTATGAGAGTGATTGATGAACACCTCATACCTTCAGCTACAGCTGGTGAATCAACTGTGTTTTACTATAAGATGAAAGGAGATTATTATCGTTACCTTGCAGAATTTAAGTCAGGCAACGAAAAGAAGGAGGCTGCTGATCAGTCAATGAAAGCATATGAGTCTGCTACCACTGCAGCAGAGGCTGAATTACCCCCCACGCATCCCATCCGATTGGGTCTGGCTTTAAATTTCTCTGTTTTCTATTATGAGATATTGAATTCACCAGAAAGAGCCTGCCATCTTGCAAAGCAGGCTTTTGATGAAGCTATTTCAGAGCTTGACACCTTGAATGAGGAGTCCTACAAAGATAGCACCTTGATCATGCAACTTCTCAGGGACAACCTGACTCTGTGGACTTCTGACATCCCAGAAGATGGAGAAGATTCTCAGAAAGTGAATGGCACTGCCAAGCTTGGTGGAGGTGAGGATGCAGAGTGAGTCTGATGGTTGGTGGCATTTTCCTTAGGATTTGATGCATGTGTTTGGGAATGAAAACATAAGGGCTGATTACTTATTTGTGTNCTAGCTAGAGATAGGGTTCCATTGTTTCCTCTTTCTCTGTTTCTTGTTGATTGGCCATACCCCATAGAGGAAAAAGAAACTCCATTTGTGCAATATTATGGTAATGTTTTTATTTGTGTGGTATCTGTCTGGAAATGGCTTGTTTCATTCCTAAGCATTTCCTCCTGTCTCTGGGGGATTGATTTGATAAGGATTGCTCATGGTGTATTTCCTGTTCCAATGAAATGCTTCAACTTCGTATGGAGATTGATCAGTCGACAATAATTCTATTTTGACTTCCATTAGTTTCCATTTGTGCTGCTGCAAAACGTGGAAGCAAATAAACGGCCAGTGATGATAACTGGGAGAAAGTGGTGTGACTGACTGCTGAGCGCTTCACGGAATAAGTAGGAACATAGCCGTTACTTCTATTTTCAGTCTAACATAGCAACTAGTTAGTTTGTGCTTTGATTATTATTTTTTGTTTAAATTAGTTTACACGTATAATTCTGTTGATAATTTTTAAAGAAAAGTTTTTAAAGTTGAGAGAAATAAACATGCAAGTAGTTTTTTGTTAGGATGAGATGATTTTCCTGACCA

Protein Sequence

Location information (JBrowse)

Scaffold	Start	End	Strand
Scaffold01201	30694	34592	+

Gene family

Gene family	subfamily
--	--

KEGG pathway

KO	Enzyme	Enzyme ID	pathway	mapID
--	--	--	--	--

Gene Ontology

molecular_function
GO:0019904 protein domain specific binding

Pfam domain

Protein	Pfam accession	Pfam name	Alignment start	Alignment end	E-value
Glyur001201s00028275.1	PF00244.15	2014/3/3	7	240	3.40E-117

Expression pattern

SRP053019

SRA Experiment	Description	TPM
SRR1783599	control	124.638
SRR1783600	control	125.600
SRR1783602	moderate drought stress	110.876
SRR1811619	moderate drought stress	110.053

DRP000996

SRA Experiment	Description	TPM
DRR006519	Root Summer glycyrrhizin high producing strain	271.292
DRR006520	Root Summer glycyrrhizin high producing strain	269.458
DRR006521	Root Winter glycyrrhizin high producing strain	118.715
DRR006522	Root Winter glycyrrhizin high producing strain	116.034
DRR006523	Root Summer glycyrrhizin low producing strain	258.410
DRR006524	Root Summer glycyrrhizin low producing strain	257.808
DRR006525	Leaf Summer glycyrrhizin high producing strain	75.584
DRR006526	Leaf Summer glycyrrhizin high producing strain	75.184

SRP065514

SRA Experiment	Description	TPM
SRR2867873	Salt Stress (root)	299.285
SRR2868004	Drought Stress (root)	374.212
SRR2967015	Control (root)	319.814

SRP215420

SRA Experiment	Description	TPM
SRR9715738	Leaf	196.431
SRR9715740	Leaf	206.473
SRR9715741	Leaf	245.714
SRR9715739	Root	112.534
SRR9715742	Root	171.135
SRR9715743	Root	164.993

SRP188776

SRA Experiment	Description	TPM
SRR8749027	MeJA induced 9h	260.448
SRR8749028	MeJA induced 9h	301.130
SRR8749029	MeJA induced 9h	194.708
SRR8749030	Uninduced	188.018
SRR8749031	Uninduced	114.000
SRR8749032	Uninduced	89.241

SRP175571

SRA Experiment	Description	TPM
SRR8400026	NaCl treatment - Root	274.402
SRR8400027	Control - Root	304.929