Gene detail information of Glyur001200s00029492 |
Functional Annotation
| Database | Orthologs | E value | Annotation |
|---|---|---|---|
| TAIR | AT2G46530.1 | 4.00E-37 | auxin response factor 11 |
| NR | XP_007134010.1 | 2.46E-59 | hypothetical protein PHAVU_010G011600g [Phaseolus vulgaris] |
| Swissprot | tr|Q9ZPY6|ARFK_ARATH | 3.00E-42 | Auxin response factor 11 |
| trEMBL | tr|V7AKC7|V7AKC7_PHAVU | 9.00E-60 | Auxin response factor {ECO:0000256|RuleBase:RU004561} |
Sequence
| Transcript Sequence |
|---|
| Protein Sequence |
|---|
Location information (JBrowse)
| Scaffold | Start | End | Strand |
|---|---|---|---|
| Scaffold01200 | 71377 | 74127 | - |
Gene family
| Gene family | subfamily |
|---|---|
| -- | -- |
KEGG pathway
| KO | Enzyme | Enzyme ID | pathway | mapID |
|---|---|---|---|---|
| -- | -- | -- | -- | -- |
Gene Ontology
| Not hits found. |
Pfam domain
| Protein | Pfam accession | Pfam name | Alignment start | Alignment end | E-value |
|---|---|---|---|---|---|
| -- | -- | -- | -- | -- | -- |
Expression pattern
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR1783599 | control | 11.214 |
| SRR1783600 | control | 12.610 |
| SRR1783602 | moderate drought stress | 8.637 |
| SRR1811619 | moderate drought stress | 8.948 |
| SRA Experiment | Description | TPM |
|---|---|---|
| DRR006519 | Root Summer glycyrrhizin high producing strain | 9.445 |
| DRR006520 | Root Summer glycyrrhizin high producing strain | 9.651 |
| DRR006521 | Root Winter glycyrrhizin high producing strain | 5.325 |
| DRR006522 | Root Winter glycyrrhizin high producing strain | 5.443 |
| DRR006523 | Root Summer glycyrrhizin low producing strain | 19.313 |
| DRR006524 | Root Summer glycyrrhizin low producing strain | 18.123 |
| DRR006525 | Leaf Summer glycyrrhizin high producing strain | 3.682 |
| DRR006526 | Leaf Summer glycyrrhizin high producing strain | 3.287 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR2867873 | Salt Stress (root) | 55.587 |
| SRR2868004 | Drought Stress (root) | 67.270 |
| SRR2967015 | Control (root) | 71.090 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR9715738 | Leaf | 7.660 |
| SRR9715740 | Leaf | 7.831 |
| SRR9715741 | Leaf | 10.575 |
| SRR9715739 | Root | 9.237 |
| SRR9715742 | Root | 35.924 |
| SRR9715743 | Root | 29.366 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8749027 | MeJA induced 9h | 6.118 |
| SRR8749028 | MeJA induced 9h | 7.289 |
| SRR8749029 | MeJA induced 9h | 3.059 |
| SRR8749030 | Uninduced | 1.440 |
| SRR8749031 | Uninduced | 1.572 |
| SRR8749032 | Uninduced | 0.848 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8400026 | NaCl treatment - Root | 32.317 |
| SRR8400027 | Control - Root | 29.347 |