Gene detail information of Glyur001199s00031526


Functional Annotation

DatabaseOrthologsE valueAnnotation
TAIRAT4G18100.12.00E-57Ribosomal protein L32e
NRADR71279.16.53E-8860S ribosomal protein L32A [Hevea brasiliensis]
COGNP_614508.15.00E-2050S ribosomal protein L32 [Methanopyrus kandleri AV19]
Swissprottr|P49211|RL321_ARATH3.00E-8060S ribosomal protein L32-1
trEMBLtr|I3NMP3|I3NMP3_HEVBR2.00E-8860S ribosomal protein L32B {ECO:0000313|EMBL:ADR71280.1}

Sequence

Transcript Sequence
Protein Sequence


Location information (JBrowse)

ScaffoldStartEndStrand
Scaffold011997832280401-


Gene family

Gene familysubfamily
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KEGG pathway

KOEnzymeEnzyme IDpathwaymapID
----------


Gene Ontology

biological_process

GO:0006412  translation


cellular_component

GO:0005622  intracellular

GO:0005840  ribosome


molecular_function

GO:0003735  structural constituent of ribosome

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Pfam domain

ProteinPfam accessionPfam nameAlignment startAlignment endE-value
Glyur001199s00031526.1PF01655.13Ribosomal_L32e151232.50E-45
Glyur001199s00031526.2PF01655.13Ribosomal_L32e151232.50E-45


Expression pattern

SRP053019

SRA ExperimentDescriptionTPM
SRR1783599control635.137
SRR1783600control628.591
SRR1783602moderate drought stress608.386
SRR1811619moderate drought stress603.366

DRP000996

SRA ExperimentDescriptionTPM
DRR006519Root Summer glycyrrhizin high producing strain578.697
DRR006520Root Summer glycyrrhizin high producing strain571.151
DRR006521Root Winter glycyrrhizin high producing strain224.615
DRR006522Root Winter glycyrrhizin high producing strain217.524
DRR006523Root Summer glycyrrhizin low producing strain468.397
DRR006524Root Summer glycyrrhizin low producing strain468.004
DRR006525Leaf Summer glycyrrhizin high producing strain118.845
DRR006526Leaf Summer glycyrrhizin high producing strain118.154

SRP065514

SRA ExperimentDescriptionTPM
SRR2867873Salt Stress (root)429.257
SRR2868004Drought Stress (root)321.789
SRR2967015Control (root)308.626

SRP215420

SRA ExperimentDescriptionTPM
SRR9715738Leaf137.569
SRR9715740Leaf118.338
SRR9715741Leaf136.161
SRR9715739Root227.948
SRR9715742Root234.649
SRR9715743Root242.704

SRP188776

SRA ExperimentDescriptionTPM
SRR8749027MeJA induced 9h571.919
SRR8749028MeJA induced 9h241.048
SRR8749029MeJA induced 9h420.652
SRR8749030Uninduced69.276
SRR8749031Uninduced53.567
SRR8749032Uninduced99.225

SRP175571

SRA ExperimentDescriptionTPM
SRR8400026NaCl treatment - Root346.988
SRR8400027Control - Root308.705

© 2021 Resource Institute for Chinese & Ethnic Materia Medica, Guizhou University of Traditional Chinese Medicine
State Key Laboratory of Plant Physiology and Biochemistry, College of Biological Sciences, China Agricultural University. All rights reserved