Gene detail information of Glyur001197s00032695 |
Functional Annotation
| Database | Orthologs | E value | Annotation |
|---|---|---|---|
| TAIR | AT1G58250.2 | 2.00E-20 | Golgi-body localisation protein domain ;RNA pol II promoter Fmp27 protein domain |
| NR | XP_004490457.1 | 5.66E-65 | PREDICTED: uncharacterized protein LOC101507025 [Cicer arietinum] |
| trEMBL | tr|G7JYG8|G7JYG8_MEDTR | 6.00E-61 | Localization and RNA pol II promoter Fmp27 domain protein {ECO:0000313|EMBL:AES98288.2} |
Sequence
| Transcript Sequence |
|---|
| Protein Sequence |
|---|
Location information (JBrowse)
| Scaffold | Start | End | Strand |
|---|---|---|---|
| Scaffold01197 | 54713 | 59671 | - |
Gene family
| Gene family | subfamily |
|---|---|
| -- | -- |
KEGG pathway
| KO | Enzyme | Enzyme ID | pathway | mapID |
|---|---|---|---|---|
| -- | -- | -- | -- | -- |
Gene Ontology
| Not hits found. |
Pfam domain
| Protein | Pfam accession | Pfam name | Alignment start | Alignment end | E-value |
|---|---|---|---|---|---|
| -- | -- | -- | -- | -- | -- |
Expression pattern
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR1783599 | control | 4.867 |
| SRR1783600 | control | 5.149 |
| SRR1783602 | moderate drought stress | 0.482 |
| SRR1811619 | moderate drought stress | 0.449 |
| SRA Experiment | Description | TPM |
|---|---|---|
| DRR006519 | Root Summer glycyrrhizin high producing strain | 0.896 |
| DRR006520 | Root Summer glycyrrhizin high producing strain | 0.944 |
| DRR006521 | Root Winter glycyrrhizin high producing strain | 0.412 |
| DRR006522 | Root Winter glycyrrhizin high producing strain | 0.369 |
| DRR006523 | Root Summer glycyrrhizin low producing strain | 0.573 |
| DRR006524 | Root Summer glycyrrhizin low producing strain | 0.538 |
| DRR006525 | Leaf Summer glycyrrhizin high producing strain | 0.160 |
| DRR006526 | Leaf Summer glycyrrhizin high producing strain | 0.261 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR2867873 | Salt Stress (root) | 1.452 |
| SRR2868004 | Drought Stress (root) | 1.427 |
| SRR2967015 | Control (root) | 1.943 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR9715738 | Leaf | 0.427 |
| SRR9715740 | Leaf | 0.376 |
| SRR9715741 | Leaf | 0.211 |
| SRR9715739 | Root | 0.321 |
| SRR9715742 | Root | 0.308 |
| SRR9715743 | Root | 0.549 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8749027 | MeJA induced 9h | 0.751 |
| SRR8749028 | MeJA induced 9h | 1.394 |
| SRR8749029 | MeJA induced 9h | 0.600 |
| SRR8749030 | Uninduced | 1.468 |
| SRR8749031 | Uninduced | 1.260 |
| SRR8749032 | Uninduced | 0.554 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8400026 | NaCl treatment - Root | 1.993 |
| SRR8400027 | Control - Root | 1.531 |