Gene detail information of Glyur001197s00032690 |
Functional Annotation
| Database | Orthologs | E value | Annotation |
|---|---|---|---|
| TAIR | AT1G58250.1 | 0 | Golgi-body localisation protein domain ;RNA pol II promoter Fmp27 protein domain |
| NR | XP_004490457.1 | 0 | PREDICTED: uncharacterized protein LOC101507025 [Cicer arietinum] |
| trEMBL | tr|K7KU85|K7KU85_SOYBN | 0 | Uncharacterized protein {ECO:0000313|EnsemblPlants:GLYMA06G10320.2} |
Sequence
| Transcript Sequence |
|---|
| Protein Sequence |
|---|
Location information (JBrowse)
| Scaffold | Start | End | Strand |
|---|---|---|---|
| Scaffold01197 | 15144 | 27892 | - |
Gene family
| Gene family | subfamily |
|---|---|
| -- | -- |
KEGG pathway
| KO | Enzyme | Enzyme ID | pathway | mapID |
|---|---|---|---|---|
| -- | -- | -- | -- | -- |
Gene Ontology
| Not hits found. |
Pfam domain
| Protein | Pfam accession | Pfam name | Alignment start | Alignment end | E-value |
|---|---|---|---|---|---|
| Glyur001197s00032690.1 | PF10351.4 | Apt1 | 90 | 591 | 1.70E-108 |
Expression pattern
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR1783599 | control | 17.884 |
| SRR1783600 | control | 17.999 |
| SRR1783602 | moderate drought stress | 4.005 |
| SRR1811619 | moderate drought stress | 3.955 |
| SRA Experiment | Description | TPM |
|---|---|---|
| DRR006519 | Root Summer glycyrrhizin high producing strain | 2.002 |
| DRR006520 | Root Summer glycyrrhizin high producing strain | 2.017 |
| DRR006521 | Root Winter glycyrrhizin high producing strain | 1.130 |
| DRR006522 | Root Winter glycyrrhizin high producing strain | 1.217 |
| DRR006523 | Root Summer glycyrrhizin low producing strain | 13.802 |
| DRR006524 | Root Summer glycyrrhizin low producing strain | 13.694 |
| DRR006525 | Leaf Summer glycyrrhizin high producing strain | 0.635 |
| DRR006526 | Leaf Summer glycyrrhizin high producing strain | 0.622 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR2867873 | Salt Stress (root) | 5.443 |
| SRR2868004 | Drought Stress (root) | 4.375 |
| SRR2967015 | Control (root) | 5.590 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR9715738 | Leaf | 2.652 |
| SRR9715740 | Leaf | 2.355 |
| SRR9715741 | Leaf | 3.212 |
| SRR9715739 | Root | 0.594 |
| SRR9715742 | Root | 1.133 |
| SRR9715743 | Root | 1.051 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8749027 | MeJA induced 9h | 21.945 |
| SRR8749028 | MeJA induced 9h | 27.654 |
| SRR8749029 | MeJA induced 9h | 23.896 |
| SRR8749030 | Uninduced | 56.514 |
| SRR8749031 | Uninduced | 36.237 |
| SRR8749032 | Uninduced | 37.038 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8400026 | NaCl treatment - Root | 10.562 |
| SRR8400027 | Control - Root | 5.623 |