Gene detail information of Glyur001196s00027112 |
Functional Annotation
| Database | Orthologs | E value | Annotation |
|---|---|---|---|
| TAIR | AT4G10100.3 | 2.00E-30 | co-factor for nitrate, reductase and xanthine dehydrogenase 7 |
| NR | NP_001238656.1 | 1.18E-58 | uncharacterized protein LOC100527353 [Glycine max] |
| COG | YP_591132.1 | 2.00E-13 | molybdopterin synthase subunit MoaD / molybdopterin synthase subunit MoaE [Candidatus Koribacter versatilis Ellin345] |
| Swissprot | tr|Q9S7A3|MOC2A_ARATH | 2.00E-38 | Molybdopterin synthase sulfur carrier subunit {ECO:0000255|HAMAP-Rule:MF_03051} |
| trEMBL | tr|C6T427|C6T427_SOYBN | 4.00E-59 | Molybdopterin synthase sulfur carrier subunit {ECO:0000256|HAMAP-Rule:MF_03051} |
Sequence
| Transcript Sequence |
|---|
| Protein Sequence |
|---|
Location information (JBrowse)
| Scaffold | Start | End | Strand |
|---|---|---|---|
| Scaffold01196 | 49825 | 52219 | + |
Gene family
| Gene family | subfamily |
|---|---|
| -- | -- |
KEGG pathway
| KO | Enzyme | Enzyme ID | pathway | mapID |
|---|---|---|---|---|
| -- | -- | -- | -- | -- |
Gene Ontology
|
Pfam domain
| Protein | Pfam accession | Pfam name | Alignment start | Alignment end | E-value |
|---|---|---|---|---|---|
| Glyur001196s00027112.1 | PF02597.15 | ThiS | 27 | 103 | 2.50E-16 |
Expression pattern
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR1783599 | control | 17.796 |
| SRR1783600 | control | 17.982 |
| SRR1783602 | moderate drought stress | 20.826 |
| SRR1811619 | moderate drought stress | 20.948 |
| SRA Experiment | Description | TPM |
|---|---|---|
| DRR006519 | Root Summer glycyrrhizin high producing strain | 30.130 |
| DRR006520 | Root Summer glycyrrhizin high producing strain | 29.843 |
| DRR006521 | Root Winter glycyrrhizin high producing strain | 18.099 |
| DRR006522 | Root Winter glycyrrhizin high producing strain | 17.807 |
| DRR006523 | Root Summer glycyrrhizin low producing strain | 16.664 |
| DRR006524 | Root Summer glycyrrhizin low producing strain | 16.710 |
| DRR006525 | Leaf Summer glycyrrhizin high producing strain | 12.137 |
| DRR006526 | Leaf Summer glycyrrhizin high producing strain | 12.610 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR2867873 | Salt Stress (root) | 76.421 |
| SRR2868004 | Drought Stress (root) | 80.942 |
| SRR2967015 | Control (root) | 65.684 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR9715738 | Leaf | 40.725 |
| SRR9715740 | Leaf | 48.618 |
| SRR9715741 | Leaf | 50.289 |
| SRR9715739 | Root | 26.920 |
| SRR9715742 | Root | 24.141 |
| SRR9715743 | Root | 22.214 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8749027 | MeJA induced 9h | 5.593 |
| SRR8749028 | MeJA induced 9h | 5.803 |
| SRR8749029 | MeJA induced 9h | 7.281 |
| SRR8749030 | Uninduced | 5.520 |
| SRR8749031 | Uninduced | 3.341 |
| SRR8749032 | Uninduced | 6.572 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8400026 | NaCl treatment - Root | 89.064 |
| SRR8400027 | Control - Root | 99.946 |