Gene detail information of Glyur001194s00035338 |
Functional Annotation
| Database | Orthologs | E value | Annotation |
|---|---|---|---|
| TAIR | AT3G12580.1 | 0 | heat shock protein 70 |
| NR | XP_006574819.1 | 0 | PREDICTED: probable mediator of RNA polymerase II transcription subunit 37c-like isoform X1 [Glycine max] |
| COG | YP_004113662.1 | 5.00E-161 | chaperone protein DnaK [Desulfurispirillum indicum S5] |
| Swissprot | tr|P09189|HSP7C_PETHY | 0 | Heat shock cognate 70 kDa protein |
| trEMBL | tr|K7K754|K7K754_SOYBN | 0 | Uncharacterized protein {ECO:0000313|EnsemblPlants:GLYMA02G09400.4} |
Sequence
| Transcript Sequence |
|---|
| Protein Sequence |
|---|
Location information (JBrowse)
| Scaffold | Start | End | Strand |
|---|---|---|---|
| Scaffold01194 | 57296 | 61825 | - |
Gene family
| Gene family | subfamily |
|---|---|
| -- | -- |
KEGG pathway
| KO | Enzyme | Enzyme ID | pathway | mapID |
|---|---|---|---|---|
| -- | -- | -- | -- | -- |
Gene Ontology
| Not hits found. |
Pfam domain
| Protein | Pfam accession | Pfam name | Alignment start | Alignment end | E-value |
|---|---|---|---|---|---|
| Glyur001194s00035338.1 | PF00012.15 | HSP70 | 195 | 784 | 3.80E-215 |
Expression pattern
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR1783599 | control | 5.217 |
| SRR1783600 | control | 5.166 |
| SRR1783602 | moderate drought stress | 4.219 |
| SRR1811619 | moderate drought stress | 4.301 |
| SRA Experiment | Description | TPM |
|---|---|---|
| DRR006519 | Root Summer glycyrrhizin high producing strain | 7.723 |
| DRR006520 | Root Summer glycyrrhizin high producing strain | 7.470 |
| DRR006521 | Root Winter glycyrrhizin high producing strain | 1.846 |
| DRR006522 | Root Winter glycyrrhizin high producing strain | 1.754 |
| DRR006523 | Root Summer glycyrrhizin low producing strain | 5.843 |
| DRR006524 | Root Summer glycyrrhizin low producing strain | 5.929 |
| DRR006525 | Leaf Summer glycyrrhizin high producing strain | 1.123 |
| DRR006526 | Leaf Summer glycyrrhizin high producing strain | 1.134 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR2867873 | Salt Stress (root) | 1.301 |
| SRR2868004 | Drought Stress (root) | 2.061 |
| SRR2967015 | Control (root) | 2.558 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR9715738 | Leaf | 0.667 |
| SRR9715740 | Leaf | 0.098 |
| SRR9715741 | Leaf | 1.484 |
| SRR9715739 | Root | 0.051 |
| SRR9715742 | Root | 8.643 |
| SRR9715743 | Root | 4.928 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8749027 | MeJA induced 9h | 0.270 |
| SRR8749028 | MeJA induced 9h | 0.110 |
| SRR8749029 | MeJA induced 9h | 0.064 |
| SRR8749030 | Uninduced | 0.013 |
| SRR8749031 | Uninduced | 0.064 |
| SRR8749032 | Uninduced | 0.144 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8400026 | NaCl treatment - Root | 1.609 |
| SRR8400027 | Control - Root | 4.100 |