Gene detail information of Glyur001192s00036938 |
Functional Annotation
| Database | Orthologs | E value | Annotation |
|---|---|---|---|
| TAIR | AT5G01030.2 | 9.00E-43 | Protein of unknown function (DUF3527) |
| NR | XP_003530243.1 | 0 | PREDICTED: dentin sialophosphoprotein-like isoform X1 [Glycine max] |
| trEMBL | tr|K7L1M8|K7L1M8_SOYBN | 0 | Uncharacterized protein {ECO:0000313|EnsemblPlants:GLYMA07G17101.2} |
Sequence
| Transcript Sequence |
|---|
| Protein Sequence |
|---|
Location information (JBrowse)
| Scaffold | Start | End | Strand |
|---|---|---|---|
| Scaffold01192 | 65231 | 68738 | + |
Gene family
| Gene family | subfamily |
|---|---|
| -- | -- |
KEGG pathway
| KO | Enzyme | Enzyme ID | pathway | mapID |
|---|---|---|---|---|
| -- | -- | -- | -- | -- |
Gene Ontology
| Not hits found. |
Pfam domain
| Protein | Pfam accession | Pfam name | Alignment start | Alignment end | E-value |
|---|---|---|---|---|---|
| Glyur001192s00036938.1 | PF12043.3 | DUF3527 | 609 | 721 | 1.60E-25 |
| Glyur001192s00036938.1 | PF12043.3 | DUF3527 | 734 | 894 | 6.40E-41 |
Expression pattern
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR1783599 | control | 3.866 |
| SRR1783600 | control | 3.781 |
| SRR1783602 | moderate drought stress | 3.209 |
| SRR1811619 | moderate drought stress | 3.195 |
| SRA Experiment | Description | TPM |
|---|---|---|
| DRR006519 | Root Summer glycyrrhizin high producing strain | 5.285 |
| DRR006520 | Root Summer glycyrrhizin high producing strain | 5.236 |
| DRR006521 | Root Winter glycyrrhizin high producing strain | 4.610 |
| DRR006522 | Root Winter glycyrrhizin high producing strain | 4.559 |
| DRR006523 | Root Summer glycyrrhizin low producing strain | 4.617 |
| DRR006524 | Root Summer glycyrrhizin low producing strain | 4.422 |
| DRR006525 | Leaf Summer glycyrrhizin high producing strain | 0.994 |
| DRR006526 | Leaf Summer glycyrrhizin high producing strain | 1.062 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR2867873 | Salt Stress (root) | 2.521 |
| SRR2868004 | Drought Stress (root) | 2.742 |
| SRR2967015 | Control (root) | 2.076 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR9715738 | Leaf | 0.769 |
| SRR9715740 | Leaf | 1.631 |
| SRR9715741 | Leaf | 1.171 |
| SRR9715739 | Root | 0.395 |
| SRR9715742 | Root | 2.286 |
| SRR9715743 | Root | 1.787 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8749027 | MeJA induced 9h | 0.317 |
| SRR8749028 | MeJA induced 9h | 0.926 |
| SRR8749029 | MeJA induced 9h | 0.233 |
| SRR8749030 | Uninduced | 0.347 |
| SRR8749031 | Uninduced | 0.336 |
| SRR8749032 | Uninduced | 0.355 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8400026 | NaCl treatment - Root | 4.417 |
| SRR8400027 | Control - Root | 5.030 |