Gene detail information of Glyur001190s00037284 |
Functional Annotation
| Database | Orthologs | E value | Annotation |
|---|---|---|---|
| TAIR | AT5G01120.1 | 4.00E-48 | Protein of unknown function (DUF674) |
| NR | KEH28932.1 | 0 | DUF674 family protein [Medicago truncatula] |
| trEMBL | tr|A0A072UGZ2|A0A072UGZ2_MEDTR | 0 | DUF674 family protein {ECO:0000313|EMBL:KEH28932.1} |
Sequence
| Transcript Sequence |
|---|
| Protein Sequence |
|---|
Location information (JBrowse)
| Scaffold | Start | End | Strand |
|---|---|---|---|
| Scaffold01190 | 20319 | 23673 | - |
Gene family
| Gene family | subfamily |
|---|---|
| -- | -- |
KEGG pathway
| KO | Enzyme | Enzyme ID | pathway | mapID |
|---|---|---|---|---|
| -- | -- | -- | -- | -- |
Gene Ontology
| Not hits found. |
Pfam domain
| Protein | Pfam accession | Pfam name | Alignment start | Alignment end | E-value |
|---|---|---|---|---|---|
| Glyur001190s00037284.1 | PF05056.7 | DUF674 | 8 | 488 | 7.40E-85 |
Expression pattern
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR1783599 | control | 35.300 |
| SRR1783600 | control | 34.646 |
| SRR1783602 | moderate drought stress | 6.452 |
| SRR1811619 | moderate drought stress | 6.419 |
| SRA Experiment | Description | TPM |
|---|---|---|
| DRR006519 | Root Summer glycyrrhizin high producing strain | 5.795 |
| DRR006520 | Root Summer glycyrrhizin high producing strain | 5.758 |
| DRR006521 | Root Winter glycyrrhizin high producing strain | 0.182 |
| DRR006522 | Root Winter glycyrrhizin high producing strain | 0.174 |
| DRR006523 | Root Summer glycyrrhizin low producing strain | 6.235 |
| DRR006524 | Root Summer glycyrrhizin low producing strain | 6.445 |
| DRR006525 | Leaf Summer glycyrrhizin high producing strain | 2.022 |
| DRR006526 | Leaf Summer glycyrrhizin high producing strain | 1.912 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR2867873 | Salt Stress (root) | 18.075 |
| SRR2868004 | Drought Stress (root) | 9.096 |
| SRR2967015 | Control (root) | 9.172 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR9715738 | Leaf | 0.582 |
| SRR9715740 | Leaf | 0.569 |
| SRR9715741 | Leaf | 0.673 |
| SRR9715739 | Root | 2.037 |
| SRR9715742 | Root | 5.633 |
| SRR9715743 | Root | 6.098 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8749027 | MeJA induced 9h | 0.000 |
| SRR8749028 | MeJA induced 9h | 0.000 |
| SRR8749029 | MeJA induced 9h | 0.000 |
| SRR8749030 | Uninduced | 0.000 |
| SRR8749031 | Uninduced | 0.000 |
| SRR8749032 | Uninduced | 0.000 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8400026 | NaCl treatment - Root | 8.080 |
| SRR8400027 | Control - Root | 9.024 |