Gene detail information of Glyur001189s00033637 |
Functional Annotation
| Database | Orthologs | E value | Annotation |
|---|---|---|---|
| TAIR | AT2G34680.1 | 0 | Outer arm dynein light chain 1 protein |
| NR | AES65731.2 | 0 | outer arm dynein light chain 1 [Medicago truncatula] |
| Swissprot | tr|F4IIU4|AIR9_ARATH | 0 | 187-kDa microtubule-associated protein AIR9 |
| trEMBL | tr|G7ISW5|G7ISW5_MEDTR | 0 | Outer arm dynein light chain 1 {ECO:0000313|EMBL:AES65731.2} |
Sequence
| Transcript Sequence |
|---|
| Protein Sequence |
|---|
Location information (JBrowse)
| Scaffold | Start | End | Strand |
|---|---|---|---|
| Scaffold01189 | 47807 | 75753 | - |
Gene family
| Gene family | subfamily |
|---|---|
| -- | -- |
KEGG pathway
| KO | Enzyme | Enzyme ID | pathway | mapID |
|---|---|---|---|---|
| -- | -- | -- | -- | -- |
Gene Ontology
| Not hits found. |
Pfam domain
| Protein | Pfam accession | Pfam name | Alignment start | Alignment end | E-value |
|---|---|---|---|---|---|
| -- | -- | -- | -- | -- | -- |
Expression pattern
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR1783599 | control | 9.653 |
| SRR1783600 | control | 9.745 |
| SRR1783602 | moderate drought stress | 8.326 |
| SRR1811619 | moderate drought stress | 8.206 |
| SRA Experiment | Description | TPM |
|---|---|---|
| DRR006519 | Root Summer glycyrrhizin high producing strain | 5.487 |
| DRR006520 | Root Summer glycyrrhizin high producing strain | 5.622 |
| DRR006521 | Root Winter glycyrrhizin high producing strain | 0.895 |
| DRR006522 | Root Winter glycyrrhizin high producing strain | 0.838 |
| DRR006523 | Root Summer glycyrrhizin low producing strain | 2.814 |
| DRR006524 | Root Summer glycyrrhizin low producing strain | 3.027 |
| DRR006525 | Leaf Summer glycyrrhizin high producing strain | 2.967 |
| DRR006526 | Leaf Summer glycyrrhizin high producing strain | 2.939 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR2867873 | Salt Stress (root) | 30.034 |
| SRR2868004 | Drought Stress (root) | 28.255 |
| SRR2967015 | Control (root) | 26.455 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR9715738 | Leaf | 4.144 |
| SRR9715740 | Leaf | 3.439 |
| SRR9715741 | Leaf | 2.921 |
| SRR9715739 | Root | 4.662 |
| SRR9715742 | Root | 25.444 |
| SRR9715743 | Root | 18.694 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8749027 | MeJA induced 9h | 7.162 |
| SRR8749028 | MeJA induced 9h | 12.070 |
| SRR8749029 | MeJA induced 9h | 4.656 |
| SRR8749030 | Uninduced | 1.254 |
| SRR8749031 | Uninduced | 2.491 |
| SRR8749032 | Uninduced | 1.602 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8400026 | NaCl treatment - Root | 34.399 |
| SRR8400027 | Control - Root | 37.218 |