Gene detail information of Glyur001188s00036037 |
Functional Annotation
| Database | Orthologs | E value | Annotation |
|---|---|---|---|
| NR | XP_002550041.1 | 9.18E-17 | 40S ribosomal protein S16 [Candida tropicalis MYA-3404] |
| trEMBL | tr|A0A022RQB3|A0A022RQB3_ERYGU | 1.00E-11 | Uncharacterized protein {ECO:0000313|EMBL:EYU42682.1} |
Sequence
| Transcript Sequence |
|---|
| Protein Sequence |
|---|
Location information (JBrowse)
| Scaffold | Start | End | Strand |
|---|---|---|---|
| Scaffold01188 | 69914 | 70567 | + |
Gene family
| Gene family | subfamily |
|---|---|
| -- | -- |
KEGG pathway
| KO | Enzyme | Enzyme ID | pathway | mapID |
|---|---|---|---|---|
| -- | -- | -- | -- | -- |
Gene Ontology
| Not hits found. |
Pfam domain
| Protein | Pfam accession | Pfam name | Alignment start | Alignment end | E-value |
|---|---|---|---|---|---|
| -- | -- | -- | -- | -- | -- |
Expression pattern
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR1783599 | control | 7.824 |
| SRR1783600 | control | 8.055 |
| SRR1783602 | moderate drought stress | 7.560 |
| SRR1811619 | moderate drought stress | 7.161 |
| SRA Experiment | Description | TPM |
|---|---|---|
| DRR006519 | Root Summer glycyrrhizin high producing strain | 12.281 |
| DRR006520 | Root Summer glycyrrhizin high producing strain | 12.135 |
| DRR006521 | Root Winter glycyrrhizin high producing strain | 5.356 |
| DRR006522 | Root Winter glycyrrhizin high producing strain | 5.498 |
| DRR006523 | Root Summer glycyrrhizin low producing strain | 12.646 |
| DRR006524 | Root Summer glycyrrhizin low producing strain | 12.900 |
| DRR006525 | Leaf Summer glycyrrhizin high producing strain | 4.449 |
| DRR006526 | Leaf Summer glycyrrhizin high producing strain | 6.178 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR2867873 | Salt Stress (root) | 0.950 |
| SRR2868004 | Drought Stress (root) | 0.511 |
| SRR2967015 | Control (root) | 0.651 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR9715738 | Leaf | 0.270 |
| SRR9715740 | Leaf | 0.294 |
| SRR9715741 | Leaf | 0.270 |
| SRR9715739 | Root | 0.565 |
| SRR9715742 | Root | 0.165 |
| SRR9715743 | Root | 0.581 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8749027 | MeJA induced 9h | 1.309 |
| SRR8749028 | MeJA induced 9h | 0.718 |
| SRR8749029 | MeJA induced 9h | 1.026 |
| SRR8749030 | Uninduced | 0.323 |
| SRR8749031 | Uninduced | 0.803 |
| SRR8749032 | Uninduced | 2.168 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8400026 | NaCl treatment - Root | 1.170 |
| SRR8400027 | Control - Root | 1.766 |