Gene detail information of Glyur001187s00033316 |
Functional Annotation
| Database | Orthologs | E value | Annotation |
|---|---|---|---|
| TAIR | AT5G02440.1 | 4.00E-10 | |
| NR | XP_003522208.1 | 2.28E-94 | PREDICTED: uncharacterized protein LOC100779898 [Glycine max] |
| Swissprot | tr|Q6DR24|Y3795_ARATH | 9.00E-09 | Uncharacterized protein At3g17950 |
| trEMBL | tr|K7KDS3|K7KDS3_SOYBN | 8.00E-95 | Uncharacterized protein {ECO:0000313|EnsemblPlants:GLYMA03G19705.1} |
Sequence
| Transcript Sequence |
|---|
| Protein Sequence |
|---|
Location information (JBrowse)
| Scaffold | Start | End | Strand |
|---|---|---|---|
| Scaffold01187 | 69147 | 71484 | - |
Gene family
| Gene family | subfamily |
|---|---|
| -- | -- |
KEGG pathway
| KO | Enzyme | Enzyme ID | pathway | mapID |
|---|---|---|---|---|
| -- | -- | -- | -- | -- |
Gene Ontology
| Not hits found. |
Pfam domain
| Protein | Pfam accession | Pfam name | Alignment start | Alignment end | E-value |
|---|---|---|---|---|---|
| -- | -- | -- | -- | -- | -- |
Expression pattern
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR1783599 | control | 1.703 |
| SRR1783600 | control | 1.814 |
| SRR1783602 | moderate drought stress | 1.869 |
| SRR1811619 | moderate drought stress | 1.582 |
| SRA Experiment | Description | TPM |
|---|---|---|
| DRR006519 | Root Summer glycyrrhizin high producing strain | 0.914 |
| DRR006520 | Root Summer glycyrrhizin high producing strain | 0.847 |
| DRR006521 | Root Winter glycyrrhizin high producing strain | 1.414 |
| DRR006522 | Root Winter glycyrrhizin high producing strain | 1.164 |
| DRR006523 | Root Summer glycyrrhizin low producing strain | 0.431 |
| DRR006524 | Root Summer glycyrrhizin low producing strain | 0.474 |
| DRR006525 | Leaf Summer glycyrrhizin high producing strain | 1.929 |
| DRR006526 | Leaf Summer glycyrrhizin high producing strain | 1.694 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR2867873 | Salt Stress (root) | 4.005 |
| SRR2868004 | Drought Stress (root) | 2.745 |
| SRR2967015 | Control (root) | 4.616 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR9715738 | Leaf | 3.859 |
| SRR9715740 | Leaf | 0.758 |
| SRR9715741 | Leaf | 1.637 |
| SRR9715739 | Root | 0.839 |
| SRR9715742 | Root | 0.818 |
| SRR9715743 | Root | 0.828 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8749027 | MeJA induced 9h | 0.646 |
| SRR8749028 | MeJA induced 9h | 0.540 |
| SRR8749029 | MeJA induced 9h | 0.449 |
| SRR8749030 | Uninduced | 0.383 |
| SRR8749031 | Uninduced | 0.716 |
| SRR8749032 | Uninduced | 0.710 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8400026 | NaCl treatment - Root | 4.096 |
| SRR8400027 | Control - Root | 5.667 |