Gene detail information of Glyur001184s00030521 |
Functional Annotation
| Database | Orthologs | E value | Annotation |
|---|---|---|---|
| TAIR | AT2G20500.1 | 7.00E-04 | |
| NR | XP_004493776.1 | 2.83E-71 | PREDICTED: uncharacterized protein LOC101515523 [Cicer arietinum] |
| trEMBL | tr|A0A072U3J7|A0A072U3J7_MEDTR | 2.00E-70 | DUF761 domain protein {ECO:0000313|EMBL:KEH23926.1} |
Sequence
| Transcript Sequence |
|---|
| Protein Sequence |
|---|
Location information (JBrowse)
| Scaffold | Start | End | Strand |
|---|---|---|---|
| Scaffold01184 | 9125 | 9694 | + |
Gene family
| Gene family | subfamily |
|---|---|
| -- | -- |
KEGG pathway
| KO | Enzyme | Enzyme ID | pathway | mapID |
|---|---|---|---|---|
| -- | -- | -- | -- | -- |
Gene Ontology
| Not hits found. |
Pfam domain
| Protein | Pfam accession | Pfam name | Alignment start | Alignment end | E-value |
|---|---|---|---|---|---|
| Glyur001184s00030521.1 | PF05553.6 | DUF761 | 164 | 181 | 6.90E-06 |
Expression pattern
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR1783599 | control | 17.783 |
| SRR1783600 | control | 17.991 |
| SRR1783602 | moderate drought stress | 27.669 |
| SRR1811619 | moderate drought stress | 26.408 |
| SRA Experiment | Description | TPM |
|---|---|---|
| DRR006519 | Root Summer glycyrrhizin high producing strain | 74.462 |
| DRR006520 | Root Summer glycyrrhizin high producing strain | 70.946 |
| DRR006521 | Root Winter glycyrrhizin high producing strain | 50.845 |
| DRR006522 | Root Winter glycyrrhizin high producing strain | 57.136 |
| DRR006523 | Root Summer glycyrrhizin low producing strain | 118.385 |
| DRR006524 | Root Summer glycyrrhizin low producing strain | 121.199 |
| DRR006525 | Leaf Summer glycyrrhizin high producing strain | 18.976 |
| DRR006526 | Leaf Summer glycyrrhizin high producing strain | 19.141 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR2867873 | Salt Stress (root) | 29.054 |
| SRR2868004 | Drought Stress (root) | 39.783 |
| SRR2967015 | Control (root) | 43.034 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR9715738 | Leaf | 23.293 |
| SRR9715740 | Leaf | 15.405 |
| SRR9715741 | Leaf | 19.627 |
| SRR9715739 | Root | 12.904 |
| SRR9715742 | Root | 32.020 |
| SRR9715743 | Root | 25.183 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8749027 | MeJA induced 9h | 83.106 |
| SRR8749028 | MeJA induced 9h | 112.055 |
| SRR8749029 | MeJA induced 9h | 162.177 |
| SRR8749030 | Uninduced | 59.452 |
| SRR8749031 | Uninduced | 149.001 |
| SRR8749032 | Uninduced | 275.239 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8400026 | NaCl treatment - Root | 19.357 |
| SRR8400027 | Control - Root | 21.091 |