Gene detail information of Glyur001184s00030520 |
Functional Annotation
| Database | Orthologs | E value | Annotation |
|---|---|---|---|
| TAIR | AT2G20515.1 | 1.00E-43 | |
| NR | XP_004493777.1 | 2.22E-77 | PREDICTED: protodermal factor 1-like [Cicer arietinum] |
| trEMBL | tr|A0A072U2J2|A0A072U2J2_MEDTR | 7.00E-72 | Pollen Ole e I family allergen {ECO:0000313|EMBL:KEH23927.1} |
Sequence
| Transcript Sequence |
|---|
| Protein Sequence |
|---|
Location information (JBrowse)
| Scaffold | Start | End | Strand |
|---|---|---|---|
| Scaffold01184 | 5852 | 7004 | + |
Gene family
| Gene family | subfamily |
|---|---|
| -- | -- |
KEGG pathway
| KO | Enzyme | Enzyme ID | pathway | mapID |
|---|---|---|---|---|
| -- | -- | -- | -- | -- |
Gene Ontology
| Not hits found. |
Pfam domain
| Protein | Pfam accession | Pfam name | Alignment start | Alignment end | E-value |
|---|---|---|---|---|---|
| -- | -- | -- | -- | -- | -- |
Expression pattern
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR1783599 | control | 2.785 |
| SRR1783600 | control | 2.849 |
| SRR1783602 | moderate drought stress | 4.157 |
| SRR1811619 | moderate drought stress | 4.280 |
| SRA Experiment | Description | TPM |
|---|---|---|
| DRR006519 | Root Summer glycyrrhizin high producing strain | 8.527 |
| DRR006520 | Root Summer glycyrrhizin high producing strain | 8.748 |
| DRR006521 | Root Winter glycyrrhizin high producing strain | 0.319 |
| DRR006522 | Root Winter glycyrrhizin high producing strain | 0.310 |
| DRR006523 | Root Summer glycyrrhizin low producing strain | 4.813 |
| DRR006524 | Root Summer glycyrrhizin low producing strain | 4.113 |
| DRR006525 | Leaf Summer glycyrrhizin high producing strain | 0.621 |
| DRR006526 | Leaf Summer glycyrrhizin high producing strain | 0.619 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR2867873 | Salt Stress (root) | 15.285 |
| SRR2868004 | Drought Stress (root) | 10.230 |
| SRR2967015 | Control (root) | 12.123 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR9715738 | Leaf | 5.200 |
| SRR9715740 | Leaf | 0.060 |
| SRR9715741 | Leaf | 0.995 |
| SRR9715739 | Root | 5.171 |
| SRR9715742 | Root | 5.873 |
| SRR9715743 | Root | 5.237 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8749027 | MeJA induced 9h | 6.615 |
| SRR8749028 | MeJA induced 9h | 2.816 |
| SRR8749029 | MeJA induced 9h | 1.507 |
| SRR8749030 | Uninduced | 3.228 |
| SRR8749031 | Uninduced | 1.746 |
| SRR8749032 | Uninduced | 2.372 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8400026 | NaCl treatment - Root | 18.397 |
| SRR8400027 | Control - Root | 20.958 |