Gene detail

Gene detail information of Glyur001183s00030467

Functional Annotation

Database	Orthologs	E value	Annotation
TAIR	AT4G05200.1	5.00E-51	cysteine-rich RLK (RECEPTOR-like protein kinase) 25
NR	XP_004496788.1	3.39E-142	PREDICTED: cysteine-rich receptor-like protein kinase 10-like isoform X1 [Cicer arietinum]
Swissprot	tr\|Q9M0X5\|CRK25_ARATH	3.00E-63	Cysteine-rich receptor-like protein kinase 25 (Precursor)
trEMBL	tr\|I1NG82\|I1NG82_SOYBN	9.00E-138	Uncharacterized protein {ECO:0000313\|EnsemblPlants:GLYMA20G27740.1}

Sequence

Transcript Sequence

>Glyur001183s00030467.1
ATGCCTTCGAATTCCTTCAGGCTTCTGTTTCTATTTGTCCTCGTTGGCTTTCTCAGTAGCAGCGCAACTACCAAAGCGCAGGGCCAGGGACCTACTTTTGTTTACCAGAGTTGCTCCTCAAGAAACGAAACCACCGCCAATAGCACCTTCAAATCGAACCTCGGGACCCTCTTCTCTTCACTATCTTCCAACGCCACCACTGCCGACGATGAATTCCACAACACCACAGTCTCCGGCGGAAGCAATAACTCCGACACGGTGTACGGACTGTTCATGTGCAGGGGCGACATTTCCTCTGAGCCGTGTGGACAATGCGTTGTGAACGCAACCCAGAAACTATCATCGGACTCAGAGTGTTCCTTGTCCAAACAGGCTGTGATCTGGTACGACGAGTGCATGGTTCGGTATTCTAACCGCTCTTTTTTCTCCACCATGGACACAAGGCCCAGTGTTTACTTGTGGAACACCGCCAATATCTCGAACCAAGAAAGCTTCATGCGTTTGTTGAACTCCACCATGAGCGAAACAGCAGATGAAGCAGTAGCAGGTTCTTCTGTTGGTACCAAGAAGTACGCCACAAGGGAAGCTAACATATCTGGATTTCAGACCCTTTATTGCTTGGCTCAGTGCACGGAGGACTTGTCGCCCCAAGATTGCAGGGATTGTCTCGGTGATGCGATAGGGGAATTTCCGCAGTGCTGCGAGGGGAAGCAGGGAGGGAGAGTTTTGTTTCCAAGCTGTAACGTTAGATATGAATTGTACCCTTTTTATACCTCCCCTGCTTCCCCACCAACGCCTTCNCCACCACCACCACCACCTGGCCTTGTTCCTGCTCCAACCACTCCATCTAGTTCGGGAGGGAGTAGCGGGATCTCATCAGGGACAATTGTTGCAATTGTGGTTCCAGTTACAGTGGCCGTGTTGCTATTCATCGTGGGAGTTTGTTTATTAAGGAAAAGAGCAGGGAAGAAGCGTGAATCTGCACAACACCAAAAAAGTAAGGATCCACTCGCGCAGAGTTAA

Protein Sequence

Location information (JBrowse)

Scaffold	Start	End	Strand
Scaffold01183	52787	54776	-

Gene family

Gene family	subfamily
--	--

KEGG pathway

KO	Enzyme	Enzyme ID	pathway	mapID
--	--	--	--	--

Gene Ontology

Not hits found.

Not hits found.

Pfam domain

Protein	Pfam accession	Pfam name	Alignment start	Alignment end	E-value
Glyur001183s00030467.1	PF01657.12	Stress-antifung	36	141	4.70E-26
Glyur001183s00030467.1	PF01657.12	Stress-antifung	157	256	8.50E-24

Expression pattern

SRP053019

SRA Experiment	Description	TPM
SRR1783599	control	0.894
SRR1783600	control	1.154
SRR1783602	moderate drought stress	1.412
SRR1811619	moderate drought stress	1.518

DRP000996

SRA Experiment	Description	TPM
DRR006519	Root Summer glycyrrhizin high producing strain	2.423
DRR006520	Root Summer glycyrrhizin high producing strain	2.748
DRR006521	Root Winter glycyrrhizin high producing strain	3.827
DRR006522	Root Winter glycyrrhizin high producing strain	3.992
DRR006523	Root Summer glycyrrhizin low producing strain	1.489
DRR006524	Root Summer glycyrrhizin low producing strain	1.423
DRR006525	Leaf Summer glycyrrhizin high producing strain	5.029
DRR006526	Leaf Summer glycyrrhizin high producing strain	4.077

SRP065514

SRA Experiment	Description	TPM
SRR2867873	Salt Stress (root)	4.173
SRR2868004	Drought Stress (root)	8.941
SRR2967015	Control (root)	8.162

SRP215420

SRA Experiment	Description	TPM
SRR9715738	Leaf	6.643
SRR9715740	Leaf	4.255
SRR9715741	Leaf	8.427
SRR9715739	Root	0.354
SRR9715742	Root	0.542
SRR9715743	Root	0.548

SRP188776

SRA Experiment	Description	TPM
SRR8749027	MeJA induced 9h	2.360
SRR8749028	MeJA induced 9h	6.661
SRR8749029	MeJA induced 9h	2.552
SRR8749030	Uninduced	4.607
SRR8749031	Uninduced	3.001
SRR8749032	Uninduced	1.083

SRP175571

SRA Experiment	Description	TPM
SRR8400026	NaCl treatment - Root	3.596
SRR8400027	Control - Root	3.236