Gene detail information of Glyur001183s00030459 |
Functional Annotation
| Database | Orthologs | E value | Annotation |
|---|---|---|---|
| TAIR | AT4G33740.3 | 3.00E-19 | |
| NR | XP_003637935.1 | 0 | hypothetical protein MTR_114s0001 [Medicago truncatula] |
| trEMBL | tr|G8A0T5|G8A0T5_MEDTR | 0 | Transmembrane protein, putative {ECO:0000313|EMBL:KEH43975.1} |
Sequence
| Transcript Sequence |
|---|
| Protein Sequence |
|---|
Location information (JBrowse)
| Scaffold | Start | End | Strand |
|---|---|---|---|
| Scaffold01183 | 1830 | 3562 | + |
Gene family
| Gene family | subfamily |
|---|---|
| -- | -- |
KEGG pathway
| KO | Enzyme | Enzyme ID | pathway | mapID |
|---|---|---|---|---|
| -- | -- | -- | -- | -- |
Gene Ontology
| Not hits found. |
Pfam domain
| Protein | Pfam accession | Pfam name | Alignment start | Alignment end | E-value |
|---|---|---|---|---|---|
| -- | -- | -- | -- | -- | -- |
Expression pattern
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR1783599 | control | 17.631 |
| SRR1783600 | control | 17.757 |
| SRR1783602 | moderate drought stress | 21.742 |
| SRR1811619 | moderate drought stress | 21.626 |
| SRA Experiment | Description | TPM |
|---|---|---|
| DRR006519 | Root Summer glycyrrhizin high producing strain | 37.674 |
| DRR006520 | Root Summer glycyrrhizin high producing strain | 36.334 |
| DRR006521 | Root Winter glycyrrhizin high producing strain | 16.949 |
| DRR006522 | Root Winter glycyrrhizin high producing strain | 16.441 |
| DRR006523 | Root Summer glycyrrhizin low producing strain | 48.981 |
| DRR006524 | Root Summer glycyrrhizin low producing strain | 49.722 |
| DRR006525 | Leaf Summer glycyrrhizin high producing strain | 25.360 |
| DRR006526 | Leaf Summer glycyrrhizin high producing strain | 24.584 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR2867873 | Salt Stress (root) | 26.886 |
| SRR2868004 | Drought Stress (root) | 39.511 |
| SRR2967015 | Control (root) | 39.228 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR9715738 | Leaf | 14.495 |
| SRR9715740 | Leaf | 18.046 |
| SRR9715741 | Leaf | 17.302 |
| SRR9715739 | Root | 1.464 |
| SRR9715742 | Root | 5.722 |
| SRR9715743 | Root | 4.732 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8749027 | MeJA induced 9h | 15.613 |
| SRR8749028 | MeJA induced 9h | 19.420 |
| SRR8749029 | MeJA induced 9h | 12.978 |
| SRR8749030 | Uninduced | 11.839 |
| SRR8749031 | Uninduced | 10.376 |
| SRR8749032 | Uninduced | 7.897 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8400026 | NaCl treatment - Root | 21.682 |
| SRR8400027 | Control - Root | 27.496 |