Gene detail information of Glyur001182s00029389 |
Functional Annotation
| Database | Orthologs | E value | Annotation |
|---|---|---|---|
| TAIR | AT4G27730.1 | 0 | oligopeptide transporter 1 |
| NR | XP_004502694.1 | 0 | PREDICTED: oligopeptide transporter 6-like [Cicer arietinum] |
| Swissprot | tr|Q9T095|OPT6_ARATH | 0 | Oligopeptide transporter 6 |
| trEMBL | tr|V7AV35|V7AV35_PHAVU | 0 | Uncharacterized protein {ECO:0000313|EMBL:ESW08463.1} |
Sequence
| Transcript Sequence |
|---|
| Protein Sequence |
|---|
Location information (JBrowse)
| Scaffold | Start | End | Strand |
|---|---|---|---|
| Scaffold01182 | 78377 | 82599 | - |
Gene family
| Gene family | subfamily |
|---|---|
| -- | -- |
KEGG pathway
| KO | Enzyme | Enzyme ID | pathway | mapID |
|---|---|---|---|---|
| -- | -- | -- | -- | -- |
Gene Ontology
|
Pfam domain
| Protein | Pfam accession | Pfam name | Alignment start | Alignment end | E-value |
|---|---|---|---|---|---|
| Glyur001182s00029389.1 | PF03169.10 | OPT | 43 | 699 | 7.40E-185 |
Expression pattern
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR1783599 | control | 0.999 |
| SRR1783600 | control | 1.013 |
| SRR1783602 | moderate drought stress | 1.129 |
| SRR1811619 | moderate drought stress | 1.189 |
| SRA Experiment | Description | TPM |
|---|---|---|
| DRR006519 | Root Summer glycyrrhizin high producing strain | 0.985 |
| DRR006520 | Root Summer glycyrrhizin high producing strain | 0.966 |
| DRR006521 | Root Winter glycyrrhizin high producing strain | 1.261 |
| DRR006522 | Root Winter glycyrrhizin high producing strain | 1.185 |
| DRR006523 | Root Summer glycyrrhizin low producing strain | 1.698 |
| DRR006524 | Root Summer glycyrrhizin low producing strain | 1.712 |
| DRR006525 | Leaf Summer glycyrrhizin high producing strain | 1.323 |
| DRR006526 | Leaf Summer glycyrrhizin high producing strain | 1.369 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR2867873 | Salt Stress (root) | 3.835 |
| SRR2868004 | Drought Stress (root) | 6.665 |
| SRR2967015 | Control (root) | 9.268 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR9715738 | Leaf | 5.873 |
| SRR9715740 | Leaf | 3.833 |
| SRR9715741 | Leaf | 8.402 |
| SRR9715739 | Root | 1.159 |
| SRR9715742 | Root | 3.972 |
| SRR9715743 | Root | 2.698 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8749027 | MeJA induced 9h | 0.447 |
| SRR8749028 | MeJA induced 9h | 0.308 |
| SRR8749029 | MeJA induced 9h | 0.217 |
| SRR8749030 | Uninduced | 0.080 |
| SRR8749031 | Uninduced | 0.192 |
| SRR8749032 | Uninduced | 0.229 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8400026 | NaCl treatment - Root | 4.000 |
| SRR8400027 | Control - Root | 3.347 |