Gene detail information of Glyur001180s00029551 |
Functional Annotation
| Database | Orthologs | E value | Annotation |
|---|---|---|---|
| TAIR | AT1G67000.1 | 1.00E-12 | Protein kinase superfamily protein |
| NR | XP_004512903.1 | 6.12E-61 | PREDICTED: probable receptor-like protein kinase At1g67000-like isoform X2 [Cicer arietinum] |
| Swissprot | tr|Q3ECH2|Y1670_ARATH | 2.00E-13 | Probable receptor-like protein kinase At1g67000 (Precursor) |
| trEMBL | tr|A0A072UD47|A0A072UD47_MEDTR | 8.00E-59 | Wall-associated receptor kinase galacturonan-binding protein {ECO:0000313|EMBL:KEH27003.1} |
Sequence
| Transcript Sequence |
|---|
| Protein Sequence |
|---|
Location information (JBrowse)
| Scaffold | Start | End | Strand |
|---|---|---|---|
| Scaffold01180 | 27697 | 28587 | + |
Gene family
| Gene family | subfamily |
|---|---|
| -- | -- |
KEGG pathway
| KO | Enzyme | Enzyme ID | pathway | mapID |
|---|---|---|---|---|
| -- | -- | -- | -- | -- |
Gene Ontology
| Not hits found. |
Pfam domain
| Protein | Pfam accession | Pfam name | Alignment start | Alignment end | E-value |
|---|---|---|---|---|---|
| -- | -- | -- | -- | -- | -- |
Expression pattern
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR1783599 | control | 5.326 |
| SRR1783600 | control | 5.487 |
| SRR1783602 | moderate drought stress | 2.069 |
| SRR1811619 | moderate drought stress | 2.013 |
| SRA Experiment | Description | TPM |
|---|---|---|
| DRR006519 | Root Summer glycyrrhizin high producing strain | 6.929 |
| DRR006520 | Root Summer glycyrrhizin high producing strain | 6.584 |
| DRR006521 | Root Winter glycyrrhizin high producing strain | 2.915 |
| DRR006522 | Root Winter glycyrrhizin high producing strain | 3.172 |
| DRR006523 | Root Summer glycyrrhizin low producing strain | 0.000 |
| DRR006524 | Root Summer glycyrrhizin low producing strain | 0.000 |
| DRR006525 | Leaf Summer glycyrrhizin high producing strain | 19.915 |
| DRR006526 | Leaf Summer glycyrrhizin high producing strain | 19.455 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR2867873 | Salt Stress (root) | 3.327 |
| SRR2868004 | Drought Stress (root) | 3.390 |
| SRR2967015 | Control (root) | 1.513 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR9715738 | Leaf | 79.156 |
| SRR9715740 | Leaf | 121.638 |
| SRR9715741 | Leaf | 99.062 |
| SRR9715739 | Root | 70.646 |
| SRR9715742 | Root | 63.761 |
| SRR9715743 | Root | 56.918 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8749027 | MeJA induced 9h | 6.948 |
| SRR8749028 | MeJA induced 9h | 12.445 |
| SRR8749029 | MeJA induced 9h | 5.245 |
| SRR8749030 | Uninduced | 6.731 |
| SRR8749031 | Uninduced | 1.647 |
| SRR8749032 | Uninduced | 1.358 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8400026 | NaCl treatment - Root | 5.137 |
| SRR8400027 | Control - Root | 12.148 |