Gene detail information of Glyur001180s00029550 |
Functional Annotation
| Database | Orthologs | E value | Annotation |
|---|---|---|---|
| TAIR | AT1G18390.2 | 3.00E-18 | Protein kinase superfamily protein |
| NR | KEH26994.1 | 4.61E-81 | wall-associated receptor kinase carboxy-terminal protein [Medicago truncatula] |
| Swissprot | tr|P0C5E2|Y1839_ARATH | 5.00E-22 | Probable serine/threonine-protein kinase At1g18390 (Precursor) |
| trEMBL | tr|I1L4A4|I1L4A4_SOYBN | 6.00E-83 | Uncharacterized protein {ECO:0000313|EnsemblPlants:GLYMA09G31320.1} |
Sequence
| Transcript Sequence |
|---|
| Protein Sequence |
|---|
Location information (JBrowse)
| Scaffold | Start | End | Strand |
|---|---|---|---|
| Scaffold01180 | 21486 | 22457 | + |
Gene family
| Gene family | subfamily |
|---|---|
| -- | -- |
KEGG pathway
| KO | Enzyme | Enzyme ID | pathway | mapID |
|---|---|---|---|---|
| -- | -- | -- | -- | -- |
Gene Ontology
| Not hits found. |
Pfam domain
| Protein | Pfam accession | Pfam name | Alignment start | Alignment end | E-value |
|---|---|---|---|---|---|
| Glyur001180s00029550.1 | PF14380.1 | WAK_assoc | 185 | 262 | 1.40E-16 |
Expression pattern
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR1783599 | control | 2.460 |
| SRR1783600 | control | 2.277 |
| SRR1783602 | moderate drought stress | 0.997 |
| SRR1811619 | moderate drought stress | 1.067 |
| SRA Experiment | Description | TPM |
|---|---|---|
| DRR006519 | Root Summer glycyrrhizin high producing strain | 0.703 |
| DRR006520 | Root Summer glycyrrhizin high producing strain | 0.811 |
| DRR006521 | Root Winter glycyrrhizin high producing strain | 6.171 |
| DRR006522 | Root Winter glycyrrhizin high producing strain | 5.736 |
| DRR006523 | Root Summer glycyrrhizin low producing strain | 1.521 |
| DRR006524 | Root Summer glycyrrhizin low producing strain | 1.309 |
| DRR006525 | Leaf Summer glycyrrhizin high producing strain | 0.128 |
| DRR006526 | Leaf Summer glycyrrhizin high producing strain | 0.011 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR2867873 | Salt Stress (root) | 3.213 |
| SRR2868004 | Drought Stress (root) | 3.777 |
| SRR2967015 | Control (root) | 4.237 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR9715738 | Leaf | 0.269 |
| SRR9715740 | Leaf | 0.110 |
| SRR9715741 | Leaf | 0.296 |
| SRR9715739 | Root | 0.345 |
| SRR9715742 | Root | 0.307 |
| SRR9715743 | Root | 0.717 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8749027 | MeJA induced 9h | 3.372 |
| SRR8749028 | MeJA induced 9h | 4.618 |
| SRR8749029 | MeJA induced 9h | 2.616 |
| SRR8749030 | Uninduced | 0.800 |
| SRR8749031 | Uninduced | 2.084 |
| SRR8749032 | Uninduced | 0.717 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8400026 | NaCl treatment - Root | 4.197 |
| SRR8400027 | Control - Root | 3.474 |