Gene detail information of Glyur001180s00029548 |
Functional Annotation
| Database | Orthologs | E value | Annotation |
|---|---|---|---|
| TAIR | AT1G18390.1 | 1.00E-11 | Protein kinase superfamily protein |
| NR | XP_004512899.1 | 1.87E-26 | PREDICTED: probable serine/threonine-protein kinase At1g18390-like isoform X1 [Cicer arietinum] |
| Swissprot | tr|P0C5E2|Y1839_ARATH | 1.00E-11 | Probable serine/threonine-protein kinase At1g18390 (Precursor) |
| trEMBL | tr|A0A072UB44|A0A072UB44_MEDTR | 1.00E-21 | Wall-associated kinase-like protein {ECO:0000313|EMBL:KEH27004.1} |
Sequence
| Transcript Sequence |
|---|
| Protein Sequence |
|---|
Location information (JBrowse)
| Scaffold | Start | End | Strand |
|---|---|---|---|
| Scaffold01180 | 14437 | 15750 | + |
Gene family
| Gene family | subfamily |
|---|---|
| -- | -- |
KEGG pathway
| KO | Enzyme | Enzyme ID | pathway | mapID |
|---|---|---|---|---|
| -- | -- | -- | -- | -- |
Gene Ontology
| Not hits found. |
Pfam domain
| Protein | Pfam accession | Pfam name | Alignment start | Alignment end | E-value |
|---|---|---|---|---|---|
| -- | -- | -- | -- | -- | -- |
Expression pattern
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR1783599 | control | 0.000 |
| SRR1783600 | control | 0.033 |
| SRR1783602 | moderate drought stress | 0.000 |
| SRR1811619 | moderate drought stress | 0.000 |
| SRA Experiment | Description | TPM |
|---|---|---|
| DRR006519 | Root Summer glycyrrhizin high producing strain | 0.000 |
| DRR006520 | Root Summer glycyrrhizin high producing strain | 0.000 |
| DRR006521 | Root Winter glycyrrhizin high producing strain | 0.144 |
| DRR006522 | Root Winter glycyrrhizin high producing strain | 0.200 |
| DRR006523 | Root Summer glycyrrhizin low producing strain | 0.000 |
| DRR006524 | Root Summer glycyrrhizin low producing strain | 0.000 |
| DRR006525 | Leaf Summer glycyrrhizin high producing strain | 0.590 |
| DRR006526 | Leaf Summer glycyrrhizin high producing strain | 0.399 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR2867873 | Salt Stress (root) | 0.014 |
| SRR2868004 | Drought Stress (root) | 0.003 |
| SRR2967015 | Control (root) | 0.000 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR9715738 | Leaf | 21.757 |
| SRR9715740 | Leaf | 26.790 |
| SRR9715741 | Leaf | 34.579 |
| SRR9715739 | Root | 0.148 |
| SRR9715742 | Root | 1.041 |
| SRR9715743 | Root | 1.135 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8749027 | MeJA induced 9h | 1.763 |
| SRR8749028 | MeJA induced 9h | 2.831 |
| SRR8749029 | MeJA induced 9h | 2.260 |
| SRR8749030 | Uninduced | 1.230 |
| SRR8749031 | Uninduced | 0.721 |
| SRR8749032 | Uninduced | 0.458 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8400026 | NaCl treatment - Root | 0.081 |
| SRR8400027 | Control - Root | 0.373 |