Gene detail information of Glyur001179s00026684 |
Functional Annotation
| Database | Orthologs | E value | Annotation |
|---|---|---|---|
| TAIR | AT5G51050.1 | 2.00E-169 | Mitochondrial substrate carrier family protein |
| NR | XP_004503037.1 | 0 | PREDICTED: calcium-binding mitochondrial carrier protein SCaMC-2-like [Cicer arietinum] |
| Swissprot | tr|O04619|ADNT1_ARATH | 3.00E-51 | Mitochondrial adenine nucleotide transporter ADNT1 |
| trEMBL | tr|G7J2S0|G7J2S0_MEDTR | 0 | Substrate carrier family protein {ECO:0000313|EMBL:AES72985.1} |
Sequence
| Transcript Sequence |
|---|
| Protein Sequence |
|---|
Location information (JBrowse)
| Scaffold | Start | End | Strand |
|---|---|---|---|
| Scaffold01179 | 66810 | 70847 | + |
Gene family
| Gene family | subfamily |
|---|---|
| -- | -- |
KEGG pathway
| KO | Enzyme | Enzyme ID | pathway | mapID |
|---|---|---|---|---|
| -- | -- | -- | -- | -- |
Gene Ontology
|
Pfam domain
| Protein | Pfam accession | Pfam name | Alignment start | Alignment end | E-value |
|---|---|---|---|---|---|
| Glyur001179s00026684.1 | PF13499.1 | EF-hand_7 | 35 | 95 | 1.40E-06 |
| Glyur001179s00026684.1 | PF13499.1 | EF-hand_7 | 102 | 182 | 2.40E-08 |
| Glyur001179s00026684.1 | PF00153.22 | Mito_carr | 224 | 307 | 1.00E-22 |
| Glyur001179s00026684.1 | PF00153.22 | Mito_carr | 316 | 403 | 2.40E-23 |
| Glyur001179s00026684.1 | PF00153.22 | Mito_carr | 415 | 475 | 9.60E-15 |
Expression pattern
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR1783599 | control | 6.203 |
| SRR1783600 | control | 6.425 |
| SRR1783602 | moderate drought stress | 3.200 |
| SRR1811619 | moderate drought stress | 3.198 |
| SRA Experiment | Description | TPM |
|---|---|---|
| DRR006519 | Root Summer glycyrrhizin high producing strain | 5.588 |
| DRR006520 | Root Summer glycyrrhizin high producing strain | 5.349 |
| DRR006521 | Root Winter glycyrrhizin high producing strain | 3.865 |
| DRR006522 | Root Winter glycyrrhizin high producing strain | 3.706 |
| DRR006523 | Root Summer glycyrrhizin low producing strain | 4.083 |
| DRR006524 | Root Summer glycyrrhizin low producing strain | 3.975 |
| DRR006525 | Leaf Summer glycyrrhizin high producing strain | 4.486 |
| DRR006526 | Leaf Summer glycyrrhizin high producing strain | 4.421 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR2867873 | Salt Stress (root) | 11.301 |
| SRR2868004 | Drought Stress (root) | 9.571 |
| SRR2967015 | Control (root) | 8.651 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR9715738 | Leaf | 7.341 |
| SRR9715740 | Leaf | 8.363 |
| SRR9715741 | Leaf | 7.279 |
| SRR9715739 | Root | 1.461 |
| SRR9715742 | Root | 5.742 |
| SRR9715743 | Root | 3.500 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8749027 | MeJA induced 9h | 5.005 |
| SRR8749028 | MeJA induced 9h | 5.487 |
| SRR8749029 | MeJA induced 9h | 2.100 |
| SRR8749030 | Uninduced | 2.893 |
| SRR8749031 | Uninduced | 2.063 |
| SRR8749032 | Uninduced | 1.061 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8400026 | NaCl treatment - Root | 10.184 |
| SRR8400027 | Control - Root | 10.655 |