Gene detail information of Glyur001179s00026682 |
Functional Annotation
| Database | Orthologs | E value | Annotation |
|---|---|---|---|
| TAIR | AT3G23760.1 | 7.00E-67 | |
| NR | XP_004501765.1 | 3.28E-122 | PREDICTED: uncharacterized protein At4g14100-like [Cicer arietinum] |
| Swissprot | tr|Q67YC9|Y4141_ARATH | 5.00E-83 | Uncharacterized protein At4g14100 (Precursor) |
| trEMBL | tr|G7J2S3|G7J2S3_MEDTR | 2.00E-119 | Transferring glycosyl group transferase {ECO:0000313|EMBL:AES72988.1} |
Sequence
| Transcript Sequence |
|---|
| Protein Sequence |
|---|
Location information (JBrowse)
| Scaffold | Start | End | Strand |
|---|---|---|---|
| Scaffold01179 | 58618 | 59915 | - |
Gene family
| Gene family | subfamily |
|---|---|
| -- | -- |
KEGG pathway
| KO | Enzyme | Enzyme ID | pathway | mapID |
|---|---|---|---|---|
| -- | -- | -- | -- | -- |
Gene Ontology
| Not hits found. |
Pfam domain
| Protein | Pfam accession | Pfam name | Alignment start | Alignment end | E-value |
|---|---|---|---|---|---|
| -- | -- | -- | -- | -- | -- |
Expression pattern
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR1783599 | control | 2.885 |
| SRR1783600 | control | 2.921 |
| SRR1783602 | moderate drought stress | 6.106 |
| SRR1811619 | moderate drought stress | 6.122 |
| SRA Experiment | Description | TPM |
|---|---|---|
| DRR006519 | Root Summer glycyrrhizin high producing strain | 0.839 |
| DRR006520 | Root Summer glycyrrhizin high producing strain | 0.835 |
| DRR006521 | Root Winter glycyrrhizin high producing strain | 0.246 |
| DRR006522 | Root Winter glycyrrhizin high producing strain | 0.240 |
| DRR006523 | Root Summer glycyrrhizin low producing strain | 0.488 |
| DRR006524 | Root Summer glycyrrhizin low producing strain | 0.609 |
| DRR006525 | Leaf Summer glycyrrhizin high producing strain | 16.317 |
| DRR006526 | Leaf Summer glycyrrhizin high producing strain | 16.116 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR2867873 | Salt Stress (root) | 3.172 |
| SRR2868004 | Drought Stress (root) | 5.191 |
| SRR2967015 | Control (root) | 4.500 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR9715738 | Leaf | 27.835 |
| SRR9715740 | Leaf | 33.194 |
| SRR9715741 | Leaf | 12.186 |
| SRR9715739 | Root | 2.820 |
| SRR9715742 | Root | 0.544 |
| SRR9715743 | Root | 1.354 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8749027 | MeJA induced 9h | 2.044 |
| SRR8749028 | MeJA induced 9h | 3.603 |
| SRR8749029 | MeJA induced 9h | 1.010 |
| SRR8749030 | Uninduced | 2.373 |
| SRR8749031 | Uninduced | 1.104 |
| SRR8749032 | Uninduced | 2.878 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8400026 | NaCl treatment - Root | 2.746 |
| SRR8400027 | Control - Root | 2.106 |