Gene detail information of Glyur001179s00026677 |
Functional Annotation
| Database | Orthologs | E value | Annotation |
|---|---|---|---|
| NR | XP_004506099.1 | 2.45E-12 | PREDICTED: putative ribonuclease H protein At1g65750-like [Cicer arietinum] |
| trEMBL | tr|I3T7V1|I3T7V1_LOTJA | 4.00E-09 | Uncharacterized protein {ECO:0000313|EMBL:AFK48593.1} |
Sequence
| Transcript Sequence |
|---|
| Protein Sequence |
|---|
Location information (JBrowse)
| Scaffold | Start | End | Strand |
|---|---|---|---|
| Scaffold01179 | 46170 | 46511 | + |
Gene family
| Gene family | subfamily |
|---|---|
| -- | -- |
KEGG pathway
| KO | Enzyme | Enzyme ID | pathway | mapID |
|---|---|---|---|---|
| -- | -- | -- | -- | -- |
Gene Ontology
| Not hits found. |
Pfam domain
| Protein | Pfam accession | Pfam name | Alignment start | Alignment end | E-value |
|---|---|---|---|---|---|
| -- | -- | -- | -- | -- | -- |
Expression pattern
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR1783599 | control | 11.296 |
| SRR1783600 | control | 12.558 |
| SRR1783602 | moderate drought stress | 12.591 |
| SRR1811619 | moderate drought stress | 11.151 |
| SRA Experiment | Description | TPM |
|---|---|---|
| DRR006519 | Root Summer glycyrrhizin high producing strain | 5.167 |
| DRR006520 | Root Summer glycyrrhizin high producing strain | 6.139 |
| DRR006521 | Root Winter glycyrrhizin high producing strain | 7.462 |
| DRR006522 | Root Winter glycyrrhizin high producing strain | 7.439 |
| DRR006523 | Root Summer glycyrrhizin low producing strain | 6.971 |
| DRR006524 | Root Summer glycyrrhizin low producing strain | 7.404 |
| DRR006525 | Leaf Summer glycyrrhizin high producing strain | 3.990 |
| DRR006526 | Leaf Summer glycyrrhizin high producing strain | 3.964 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR2867873 | Salt Stress (root) | 2.980 |
| SRR2868004 | Drought Stress (root) | 3.424 |
| SRR2967015 | Control (root) | 4.979 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR9715738 | Leaf | 4.919 |
| SRR9715740 | Leaf | 0.000 |
| SRR9715741 | Leaf | 5.495 |
| SRR9715739 | Root | 0.000 |
| SRR9715742 | Root | 5.788 |
| SRR9715743 | Root | 2.668 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8749027 | MeJA induced 9h | 0.626 |
| SRR8749028 | MeJA induced 9h | 0.291 |
| SRR8749029 | MeJA induced 9h | 0.561 |
| SRR8749030 | Uninduced | 0.163 |
| SRR8749031 | Uninduced | 0.557 |
| SRR8749032 | Uninduced | 0.688 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8400026 | NaCl treatment - Root | 5.188 |
| SRR8400027 | Control - Root | 4.606 |