Gene detail information of Glyur001178s00037211 |
Functional Annotation
| Database | Orthologs | E value | Annotation |
|---|---|---|---|
| TAIR | AT1G75710.1 | 1.00E-81 | C2H2-like zinc finger protein |
| NR | XP_004500590.1 | 0 | PREDICTED: uncharacterized protein LOC101506200 [Cicer arietinum] |
| trEMBL | tr|I1KA61|I1KA61_SOYBN | 0 | Uncharacterized protein {ECO:0000313|EnsemblPlants:GLYMA06G11510.1} |
Sequence
| Transcript Sequence |
|---|
| Protein Sequence |
|---|
Location information (JBrowse)
| Scaffold | Start | End | Strand |
|---|---|---|---|
| Scaffold01178 | 30028 | 32275 | - |
Gene family
| Gene family | subfamily |
|---|---|
| -- | -- |
KEGG pathway
| KO | Enzyme | Enzyme ID | pathway | mapID |
|---|---|---|---|---|
| -- | -- | -- | -- | -- |
Gene Ontology
|
Pfam domain
| Protein | Pfam accession | Pfam name | Alignment start | Alignment end | E-value |
|---|---|---|---|---|---|
| -- | -- | -- | -- | -- | -- |
Expression pattern
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR1783599 | control | 0.584 |
| SRR1783600 | control | 0.517 |
| SRR1783602 | moderate drought stress | 0.377 |
| SRR1811619 | moderate drought stress | 0.462 |
| SRA Experiment | Description | TPM |
|---|---|---|
| DRR006519 | Root Summer glycyrrhizin high producing strain | 0.316 |
| DRR006520 | Root Summer glycyrrhizin high producing strain | 0.384 |
| DRR006521 | Root Winter glycyrrhizin high producing strain | 0.066 |
| DRR006522 | Root Winter glycyrrhizin high producing strain | 0.064 |
| DRR006523 | Root Summer glycyrrhizin low producing strain | 0.065 |
| DRR006524 | Root Summer glycyrrhizin low producing strain | 0.065 |
| DRR006525 | Leaf Summer glycyrrhizin high producing strain | 2.088 |
| DRR006526 | Leaf Summer glycyrrhizin high producing strain | 2.333 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR2867873 | Salt Stress (root) | 8.206 |
| SRR2868004 | Drought Stress (root) | 5.168 |
| SRR2967015 | Control (root) | 7.665 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR9715738 | Leaf | 1.186 |
| SRR9715740 | Leaf | 0.631 |
| SRR9715741 | Leaf | 0.764 |
| SRR9715739 | Root | 0.356 |
| SRR9715742 | Root | 0.274 |
| SRR9715743 | Root | 0.144 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8749027 | MeJA induced 9h | 0.491 |
| SRR8749028 | MeJA induced 9h | 0.095 |
| SRR8749029 | MeJA induced 9h | 0.035 |
| SRR8749030 | Uninduced | 0.000 |
| SRR8749031 | Uninduced | 0.053 |
| SRR8749032 | Uninduced | 0.034 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8400026 | NaCl treatment - Root | 1.334 |
| SRR8400027 | Control - Root | 1.365 |