Gene detail information of Glyur001176s00030760 |
Functional Annotation
| Database | Orthologs | E value | Annotation |
|---|---|---|---|
| TAIR | AT5G04890.1 | 2.00E-12 | HSP20-like chaperones superfamily protein |
| NR | XP_004499609.1 | 4.23E-121 | PREDICTED: DNA ligase 1-like [Cicer arietinum] |
| trEMBL | tr|K7LZA7|K7LZA7_SOYBN | 7.00E-112 | Uncharacterized protein {ECO:0000313|EnsemblPlants:GLYMA13G18550.2} |
Sequence
| Transcript Sequence |
|---|
| Protein Sequence |
|---|
Location information (JBrowse)
| Scaffold | Start | End | Strand |
|---|---|---|---|
| Scaffold01176 | 71869 | 74015 | - |
Gene family
| Gene family | subfamily |
|---|---|
| -- | -- |
KEGG pathway
| KO | Enzyme | Enzyme ID | pathway | mapID |
|---|---|---|---|---|
| -- | -- | -- | -- | -- |
Gene Ontology
| Not hits found. |
Pfam domain
| Protein | Pfam accession | Pfam name | Alignment start | Alignment end | E-value |
|---|---|---|---|---|---|
| -- | -- | -- | -- | -- | -- |
Expression pattern
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR1783599 | control | 1.412 |
| SRR1783600 | control | 1.473 |
| SRR1783602 | moderate drought stress | 1.279 |
| SRR1811619 | moderate drought stress | 1.221 |
| SRA Experiment | Description | TPM |
|---|---|---|
| DRR006519 | Root Summer glycyrrhizin high producing strain | 3.286 |
| DRR006520 | Root Summer glycyrrhizin high producing strain | 2.800 |
| DRR006521 | Root Winter glycyrrhizin high producing strain | 0.000 |
| DRR006522 | Root Winter glycyrrhizin high producing strain | 0.000 |
| DRR006523 | Root Summer glycyrrhizin low producing strain | 5.835 |
| DRR006524 | Root Summer glycyrrhizin low producing strain | 6.005 |
| DRR006525 | Leaf Summer glycyrrhizin high producing strain | 2.333 |
| DRR006526 | Leaf Summer glycyrrhizin high producing strain | 2.440 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR2867873 | Salt Stress (root) | 3.458 |
| SRR2868004 | Drought Stress (root) | 4.345 |
| SRR2967015 | Control (root) | 3.570 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR9715738 | Leaf | 1.754 |
| SRR9715740 | Leaf | 0.573 |
| SRR9715741 | Leaf | 0.764 |
| SRR9715739 | Root | 0.097 |
| SRR9715742 | Root | 3.118 |
| SRR9715743 | Root | 1.646 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8749027 | MeJA induced 9h | 0.000 |
| SRR8749028 | MeJA induced 9h | 0.054 |
| SRR8749029 | MeJA induced 9h | 0.000 |
| SRR8749030 | Uninduced | 0.153 |
| SRR8749031 | Uninduced | 0.265 |
| SRR8749032 | Uninduced | 0.085 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8400026 | NaCl treatment - Root | 2.151 |
| SRR8400027 | Control - Root | 2.472 |