Gene detail information of Glyur001176s00030753 |
Functional Annotation
| Database | Orthologs | E value | Annotation |
|---|---|---|---|
| TAIR | AT5G47690.3 | 3.00E-15 | binding |
| NR | XP_006601390.1 | 2.66E-24 | PREDICTED: sister chromatid cohesion protein PDS5 homolog B-B-like [Glycine max] |
| trEMBL | tr|K7MJA4|K7MJA4_SOYBN | 1.00E-24 | Uncharacterized protein {ECO:0000313|EnsemblPlants:GLYMA17G00935.1} |
Sequence
| Transcript Sequence |
|---|
| Protein Sequence |
|---|
Location information (JBrowse)
| Scaffold | Start | End | Strand |
|---|---|---|---|
| Scaffold01176 | 26397 | 30810 | - |
Gene family
| Gene family | subfamily |
|---|---|
| -- | -- |
KEGG pathway
| KO | Enzyme | Enzyme ID | pathway | mapID |
|---|---|---|---|---|
| -- | -- | -- | -- | -- |
Gene Ontology
| Not hits found. |
Pfam domain
| Protein | Pfam accession | Pfam name | Alignment start | Alignment end | E-value |
|---|---|---|---|---|---|
| -- | -- | -- | -- | -- | -- |
Expression pattern
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR1783599 | control | 2.617 |
| SRR1783600 | control | 2.587 |
| SRR1783602 | moderate drought stress | 5.775 |
| SRR1811619 | moderate drought stress | 5.676 |
| SRA Experiment | Description | TPM |
|---|---|---|
| DRR006519 | Root Summer glycyrrhizin high producing strain | 2.985 |
| DRR006520 | Root Summer glycyrrhizin high producing strain | 2.587 |
| DRR006521 | Root Winter glycyrrhizin high producing strain | 2.647 |
| DRR006522 | Root Winter glycyrrhizin high producing strain | 2.354 |
| DRR006523 | Root Summer glycyrrhizin low producing strain | 1.986 |
| DRR006524 | Root Summer glycyrrhizin low producing strain | 1.612 |
| DRR006525 | Leaf Summer glycyrrhizin high producing strain | 2.503 |
| DRR006526 | Leaf Summer glycyrrhizin high producing strain | 2.374 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR2867873 | Salt Stress (root) | 4.470 |
| SRR2868004 | Drought Stress (root) | 6.004 |
| SRR2967015 | Control (root) | 5.971 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR9715738 | Leaf | 1.931 |
| SRR9715740 | Leaf | 2.779 |
| SRR9715741 | Leaf | 3.044 |
| SRR9715739 | Root | 1.301 |
| SRR9715742 | Root | 1.233 |
| SRR9715743 | Root | 1.007 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8749027 | MeJA induced 9h | 4.374 |
| SRR8749028 | MeJA induced 9h | 8.987 |
| SRR8749029 | MeJA induced 9h | 5.219 |
| SRR8749030 | Uninduced | 6.324 |
| SRR8749031 | Uninduced | 3.279 |
| SRR8749032 | Uninduced | 1.828 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8400026 | NaCl treatment - Root | 9.370 |
| SRR8400027 | Control - Root | 7.537 |