Gene detail information of Glyur001174s00035700 |
Functional Annotation
| Database | Orthologs | E value | Annotation |
|---|
Sequence
| Transcript Sequence |
|---|
| Protein Sequence |
|---|
Location information (JBrowse)
| Scaffold | Start | End | Strand |
|---|---|---|---|
| Scaffold01174 | 72779 | 76195 | - |
Gene family
| Gene family | subfamily |
|---|---|
| -- | -- |
KEGG pathway
| KO | Enzyme | Enzyme ID | pathway | mapID |
|---|---|---|---|---|
| -- | -- | -- | -- | -- |
Gene Ontology
| Not hits found. |
Pfam domain
| Protein | Pfam accession | Pfam name | Alignment start | Alignment end | E-value |
|---|---|---|---|---|---|
| Glyur001174s00035700.2 | PF00996.13 | GDI | 1 | 24 | 0.00018 |
| Glyur001174s00035700.3 | PF00996.13 | GDI | 1 | 24 | 9.60E-05 |
Expression pattern
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR1783599 | control | 12.921 |
| SRR1783600 | control | 13.206 |
| SRR1783602 | moderate drought stress | 21.089 |
| SRR1811619 | moderate drought stress | 20.244 |
| SRA Experiment | Description | TPM |
|---|---|---|
| DRR006519 | Root Summer glycyrrhizin high producing strain | 6.307 |
| DRR006520 | Root Summer glycyrrhizin high producing strain | 6.584 |
| DRR006521 | Root Winter glycyrrhizin high producing strain | 8.331 |
| DRR006522 | Root Winter glycyrrhizin high producing strain | 7.083 |
| DRR006523 | Root Summer glycyrrhizin low producing strain | 5.777 |
| DRR006524 | Root Summer glycyrrhizin low producing strain | 4.881 |
| DRR006525 | Leaf Summer glycyrrhizin high producing strain | 6.510 |
| DRR006526 | Leaf Summer glycyrrhizin high producing strain | 6.049 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR2867873 | Salt Stress (root) | 2.144 |
| SRR2868004 | Drought Stress (root) | 2.812 |
| SRR2967015 | Control (root) | 2.823 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR9715738 | Leaf | 4.901 |
| SRR9715740 | Leaf | 5.939 |
| SRR9715741 | Leaf | 8.596 |
| SRR9715739 | Root | 3.025 |
| SRR9715742 | Root | 3.621 |
| SRR9715743 | Root | 4.249 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8749027 | MeJA induced 9h | 1.119 |
| SRR8749028 | MeJA induced 9h | 1.052 |
| SRR8749029 | MeJA induced 9h | 0.505 |
| SRR8749030 | Uninduced | 0.357 |
| SRR8749031 | Uninduced | 0.028 |
| SRR8749032 | Uninduced | 0.182 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8400026 | NaCl treatment - Root | 20.359 |
| SRR8400027 | Control - Root | 19.228 |