Gene detail

Gene detail information of Glyur001173s00032975.1

Functional Annotation

Database	Orthologs	E value	Annotation
TAIR	AT3G11470.1	2.00E-69	4'-phosphopantetheinyl transferase superfamily
NR	XP_004494045.1	7.75E-172	PREDICTED: uncharacterized protein LOC101494039 [Cicer arietinum]
COG	YP_008152537.1	2.00E-33	4-phosphopantetheinyl transferase [Sorangium cellulosum So0157-2]
trEMBL	tr\|A0A072VJ05\|A0A072VJ05_MEDTR	6.00E-169	4'-phosphopantetheinyl transferase family protein {ECO:0000313\|EMBL:KEH42009.1}

Sequence

Transcript Sequence

>Glyur001173s00032975.1
ATGCGTTACAACAAAGCACCGTTAACGATGAAGATATATTGCTTTGGAAGGAATCTCATCACTGCATCATCACCCTCCTTGTCTTCTCTGCAACTTCCCGCACAAAAGGAAGCGCATTTTTGGTATGTTTTGCCTGATGAGATTAAGTGCACAAACCTATTGANCCGATATTTTGAAATTCTATCACCTTGTGAGAAAGAAAATGTAATTTGCATGCGTGGGGAAGAGCTAAAGAAAAGAGCACTCCTAGCTCGTGCACTGGTTCGCACTACATTAGCAAGATACCAGACGAATTGTCAGATTGATCCAAAATCCTTGAAGTTTAGGAAGAACAATTATGGCAAGCCTGAGGTAGACTGGCAATATGCTGATGACTGGAGCCTACCACCGCTGCATTTTAATATCTCTCACACTTCATCTTTGATAGCTTGCGGAGTAACTGTGGGCTCACCTATTGGTATTGATGTGGAAGAGAAGCAAAGGAGGTTAAAAAATGATATTTTAGCCTTTGCACGACGATATTTTTCTCCCCATGAAATAGAAATGCTGAATCACGTTGTAGACCCTGAGCTTCGGNATCAGGAGTTTGTAAAATTATGGACTCTAAAGAGACATTTCCCATTTATAGGAGTCATATGTAAAGCAATAGGAAGAGGCTTCTCAGCGTCACCTTTTAAGACTTTTACTGTTCGATTAAGAGACCAAATGAAAGGAGGCATCCAATTCCCACCTCATATTATTTCTAAGATTCTCTCAAGCAACTGGCATTTTGTGCTTCCGGAGTTGGCTGGTTCTCATTATGCTGTCCCTCATGTTGTCGTTTGCAGGCAAAGGGGCATTATTCCAGTAAATCTGACACTAAGGAAAACAATCCCATTTGTTGGAGATGAATGTGTTTCTGGAACTGACACTGCCGTAGTGATTGGTGGCTTGGCTAGACTTTTGGGCTCTGCGTTGCTGAATCTCGAGAAAATCGCAAAGCAAAACAATGATTTTGGTTGGTTCAACAACCTCCATTGTGTCCTTTATTGA

Protein Sequence

Location information (JBrowse)

Scaffold	Start	End	Strand
Scaffold01173	54885	59171	-

Gene family

Gene family	subfamily
--	--

KEGG pathway

KO	Enzyme	Enzyme ID	pathway	mapID
K06133	LYS5, acpT	EC:2.7.8.-	Pantothenate and CoA biosynthesis	map00770

Gene Ontology

molecular_function

GO:0000287 magnesium ion binding

GO:0008897 holo-[acyl-carrier-protein] synthase activity

Pfam domain

Protein	Pfam accession	Pfam name	Alignment start	Alignment end	E-value
Glyur001173s00032975.1	PF01648.15	ACPS	151	203	4.00E-06

Expression pattern

SRP053019

SRA Experiment	Description	TPM
SRR1783599	control	2.976
SRR1783600	control	2.396
SRR1783602	moderate drought stress	3.198
SRR1811619	moderate drought stress	3.182

DRP000996

SRA Experiment	Description	TPM
DRR006519	Root Summer glycyrrhizin high producing strain	2.608
DRR006520	Root Summer glycyrrhizin high producing strain	2.878
DRR006521	Root Winter glycyrrhizin high producing strain	4.468
DRR006522	Root Winter glycyrrhizin high producing strain	4.170
DRR006523	Root Summer glycyrrhizin low producing strain	3.075
DRR006524	Root Summer glycyrrhizin low producing strain	3.342
DRR006525	Leaf Summer glycyrrhizin high producing strain	1.195
DRR006526	Leaf Summer glycyrrhizin high producing strain	0.947

SRP065514

SRA Experiment	Description	TPM
SRR2867873	Salt Stress (root)	2.788
SRR2868004	Drought Stress (root)	2.976
SRR2967015	Control (root)	3.956

SRP215420

SRA Experiment	Description	TPM
SRR9715738	Leaf	2.440
SRR9715740	Leaf	2.501
SRR9715741	Leaf	2.722
SRR9715739	Root	0.597
SRR9715742	Root	1.814
SRR9715743	Root	1.035

SRP188776

SRA Experiment	Description	TPM
SRR8749027	MeJA induced 9h	6.110
SRR8749028	MeJA induced 9h	7.252
SRR8749029	MeJA induced 9h	5.323
SRR8749030	Uninduced	5.870
SRR8749031	Uninduced	3.446
SRR8749032	Uninduced	4.401

SRP175571

SRA Experiment	Description	TPM
SRR8400026	NaCl treatment - Root	4.241
SRR8400027	Control - Root	4.064