Gene detail information of Glyur001170s00029943 |
Functional Annotation
| Database | Orthologs | E value | Annotation |
|---|---|---|---|
| TAIR | AT2G31490.1 | 5.00E-32 | |
| NR | XP_003529088.1 | 1.47E-43 | PREDICTED: uncharacterized protein LOC100306283 isoform 1 [Glycine max] |
| trEMBL | tr|V7C481|V7C481_PHAVU | 4.00E-43 | Uncharacterized protein {ECO:0000313|EMBL:ESW24987.1} |
Sequence
| Transcript Sequence |
|---|
| Protein Sequence |
|---|
Location information (JBrowse)
| Scaffold | Start | End | Strand |
|---|---|---|---|
| Scaffold01170 | 34479 | 36332 | - |
Gene family
| Gene family | subfamily |
|---|---|
| -- | -- |
KEGG pathway
| KO | Enzyme | Enzyme ID | pathway | mapID |
|---|---|---|---|---|
| -- | -- | -- | -- | -- |
Gene Ontology
| Not hits found. |
Pfam domain
| Protein | Pfam accession | Pfam name | Alignment start | Alignment end | E-value |
|---|---|---|---|---|---|
| -- | -- | -- | -- | -- | -- |
Expression pattern
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR1783599 | control | 126.983 |
| SRR1783600 | control | 133.711 |
| SRR1783602 | moderate drought stress | 130.647 |
| SRR1811619 | moderate drought stress | 131.904 |
| SRA Experiment | Description | TPM |
|---|---|---|
| DRR006519 | Root Summer glycyrrhizin high producing strain | 60.287 |
| DRR006520 | Root Summer glycyrrhizin high producing strain | 60.222 |
| DRR006521 | Root Winter glycyrrhizin high producing strain | 49.889 |
| DRR006522 | Root Winter glycyrrhizin high producing strain | 47.939 |
| DRR006523 | Root Summer glycyrrhizin low producing strain | 31.062 |
| DRR006524 | Root Summer glycyrrhizin low producing strain | 31.681 |
| DRR006525 | Leaf Summer glycyrrhizin high producing strain | 26.187 |
| DRR006526 | Leaf Summer glycyrrhizin high producing strain | 26.187 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR2867873 | Salt Stress (root) | 254.339 |
| SRR2868004 | Drought Stress (root) | 239.166 |
| SRR2967015 | Control (root) | 179.095 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR9715738 | Leaf | 194.623 |
| SRR9715740 | Leaf | 176.892 |
| SRR9715741 | Leaf | 166.359 |
| SRR9715739 | Root | 72.691 |
| SRR9715742 | Root | 91.736 |
| SRR9715743 | Root | 94.058 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8749027 | MeJA induced 9h | 190.628 |
| SRR8749028 | MeJA induced 9h | 85.285 |
| SRR8749029 | MeJA induced 9h | 169.104 |
| SRR8749030 | Uninduced | 96.043 |
| SRR8749031 | Uninduced | 40.535 |
| SRR8749032 | Uninduced | 82.202 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8400026 | NaCl treatment - Root | 324.255 |
| SRR8400027 | Control - Root | 330.523 |