Gene detail information of Glyur001169s00038135.1 |
Functional Annotation
| Database | Orthologs | E value | Annotation |
|---|---|---|---|
| TAIR | AT1G79160.1 | 1.00E-51 | |
| NR | XP_004488798.1 | 5.92E-135 | PREDICTED: uncharacterized protein LOC101489878 [Cicer arietinum] |
| trEMBL | tr|A0A072V8W9|A0A072V8W9_MEDTR | 6.00E-130 | YUP8H12R.23 protein, putative {ECO:0000313|EMBL:KEH38252.1} |
Sequence
| Transcript Sequence |
|---|
| Protein Sequence |
|---|
Location information (JBrowse)
| Scaffold | Start | End | Strand |
|---|---|---|---|
| Scaffold01169 | 39441 | 46952 | - |
Gene family
| Gene family | subfamily |
|---|---|
| EAR motif-containing Proteins | other |
KEGG pathway
| KO | Enzyme | Enzyme ID | pathway | mapID |
|---|---|---|---|---|
| -- | -- | -- | -- | -- |
Gene Ontology
| Not hits found. |
Pfam domain
| Protein | Pfam accession | Pfam name | Alignment start | Alignment end | E-value |
|---|---|---|---|---|---|
| -- | -- | -- | -- | -- | -- |
Expression pattern
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR1783599 | control | 5.387 |
| SRR1783600 | control | 5.359 |
| SRR1783602 | moderate drought stress | 6.756 |
| SRR1811619 | moderate drought stress | 7.051 |
| SRA Experiment | Description | TPM |
|---|---|---|
| DRR006519 | Root Summer glycyrrhizin high producing strain | 9.569 |
| DRR006520 | Root Summer glycyrrhizin high producing strain | 9.372 |
| DRR006521 | Root Winter glycyrrhizin high producing strain | 3.286 |
| DRR006522 | Root Winter glycyrrhizin high producing strain | 3.019 |
| DRR006523 | Root Summer glycyrrhizin low producing strain | 6.890 |
| DRR006524 | Root Summer glycyrrhizin low producing strain | 6.861 |
| DRR006525 | Leaf Summer glycyrrhizin high producing strain | 18.848 |
| DRR006526 | Leaf Summer glycyrrhizin high producing strain | 19.910 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR2867873 | Salt Stress (root) | 8.577 |
| SRR2868004 | Drought Stress (root) | 14.399 |
| SRR2967015 | Control (root) | 12.831 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR9715738 | Leaf | 46.859 |
| SRR9715740 | Leaf | 63.731 |
| SRR9715741 | Leaf | 89.467 |
| SRR9715739 | Root | 10.130 |
| SRR9715742 | Root | 10.062 |
| SRR9715743 | Root | 7.566 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8749027 | MeJA induced 9h | 5.479 |
| SRR8749028 | MeJA induced 9h | 8.445 |
| SRR8749029 | MeJA induced 9h | 5.114 |
| SRR8749030 | Uninduced | 29.069 |
| SRR8749031 | Uninduced | 21.643 |
| SRR8749032 | Uninduced | 14.896 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8400026 | NaCl treatment - Root | 21.412 |
| SRR8400027 | Control - Root | 15.699 |