Gene detail

Gene detail information of Glyur001167s00034011

Functional Annotation

Database	Orthologs	E value	Annotation
TAIR	AT5G14230.1	0
NR	XP_003553235.1	0	PREDICTED: ankyrin-2-like [Glycine max]
COG	YP_001958455.1	2.00E-33	hypothetical protein Aasi_1435 [Candidatus Amoebophilus asiaticus 5a2]
Swissprot	tr\|Q75HP9\|AKT2_ORYSJ	3.00E-10	Potassium channel AKT2
trEMBL	tr\|K7MXC3\|K7MXC3_SOYBN	0	Uncharacterized protein {ECO:0000313\|EnsemblPlants:GLYMA19G25000.2}

Sequence

Transcript Sequence

>Glyur001167s00034011.1
ATGACGGTGTTTTCCGCCAAGCAGGTTTTCCCGGTGGACTACGAGGCCGAGGTATCGCGTCGCCTTCTAGAAGCTTCTCACTCCGGCGATCTGGCATTGGCACTCCGCTGCATTTCCGATCCCTCCGTTGACGTCAACTTCGCCGGCGCCGTCACGTTGAAGACAAGGAGCACCGACCTCCTCCTCATCGCCGAATCCGCCAGCCAGGTCCGTATCGAGTTCCAGGAATTCGTCACCGACGTCACGCCTCTCTTCCTCGCCGTTCACGCCGGAAACGCCTCCCTCGTCAGGAAGTTACTGAATGTGGGAGCTGATGTAAACCAAAAGCTATTCAGAGGTTTTGCAACGACTGCAGCAGTGAGAGAGGGCCACTTTGATATTCTTGAGATCTTACTTAAGGCAGGGGCATCGCAGCCAGCTTGNGAAGAAGCTCTTCTGGAGGCAAGCTGCCATGGGCAAGCAGGGTGTGAGGAATTGCTCATGGGCTCTGATTTGATCCGACCNCATGTTGCTGTACATGCTCTTGTGACCGCATGCTGCAGGGGGTTTGTACAGGTGGTTGAGACGCTCATAAAGTGTGGTGTGGATGCGAATGTGAGGGACCGGGTACTTTTGCAGTCACTTAAGCCTTCTCTCCACACAAATGTGGATTGTAATGCACTTGTTGCGGCTGTAGTTCATAGGCAGGTCCCTGTTGTCGGTTTGCTACTTCAGAATGGTGCTAGGATAGACTTCGAAGTAAGGCTTGGAGCATGGTCATGGGACACTTCAACTGGTGAAGAGCTTCGTGTGGGTGCTGGACTGGGAGAACCATATGGCATCACCTGGTGTGCAGTTGAGTATTTTGAAAGAAGTGGTGCTATATTACGCTTGCTCCTACAACATGTCTCCTTCAATAGTTGCCACCGTGGAAGAACCCTTCTACACCATGCTATCCTCTGTGGCAATGTTGAGGCTGTCAGGATACTCTTGGAATGTGGTGCTAATGTGGAATCCCCAGTCAAAACAACCAGCAATACTGAATTCCTTCCTATACACATGGCGTCTCGTCTTGGCTCACCGACAATAGTTCAATGCCTTGTTGATTTTGGTTGTGATTTGAACTCTTTAACAGACACTGGTGACACAGCTCTGATGATCTGTGCAAAATACAAGCAAGAGGAGTGTCTCAAAGTACTAACAAGGGCTGGTGCTGATTTTGGCTTGGTGAATATTGCTGGTCAATCTGCAAGTTCAATTGCTGAGTCGAACAAGTGGTCACTTGGTTTTCAACAAGCAGTGTTGGATGCAATTAGAAAAGGCAAGATACCCAAATCCAGTAATGCTTCTACCTTTTCCCCCTTAATGTTTGTGGCTCAAGCAGGAGACACTGAAGCATTGAAAACTGTCATTGAATCTGGAGAATTTGATCTTGACTNTCAAGATGATTATGGTTTCTCTGCGGTTATGCATACAGCCGCGAAAGGCCACGTGGAATCGTTTCGATTGCTTGTATATGCTGGAGCTGATGTAAAGTTGTGCAATAAATCTGGTGAAACAGCAATAACCTTATCTGAATTGAATCCAAACTGTGATTTATTTGAAAAGGTCATGCTTGAATTTGCACTTGAAAAGGGTAACCATAACACTGGTGGCTTCTACGCTTTACACTGCGCAGCTCGTCGCGGTGACTTGGATGCTGTTACATTGCTCACAAGCAAAGGTTACGATGTGAATGTCCCTGATGGAGAAGACTACACTCCACTCATGTTAGCAGCAAGGGAAGGCCATGCTTCCATTTGTGAGCTTCTAATCTCAAACGGTGCTCATTGCAACGCGAAAAACGCCAGAGGGGAAACCGCACTCTTGCTTGCAAGGAAATTCGCAGGATCAGGGATGAAAANCAAAAACGATGCAGAGGCTGTGATACTAGATGAACTTGCTCGTAAATTAGTACTAGGTGGTGCCTATGTTCAGAAACACACCAAGGGTGGGAAGGGAACCCCACATGTGAAACAACTACGCATGTTGGGCTCTGAAGGTGTGTTGCATTGGGGAAAGTCAAGTCGGAGAAATGTGTTGTGTTGTGATGCAGAGTTGGGGCCAAGCTCAACATTGCGTAGAAACAGGTGCAAGAAAGGTGATGCAGATGAACCTGGGATGTTTAGGGTGGTTACTAACAAGAAGAGGGAAGTGCATTTCGTGTGTGATGTGGGGTTAGAAGGTGCTGAACTTTGGGTGAGGGGTATTAAACTTGTAACCAGAGAGGCTATTTTTCATAAGCAGAGATCGATAATGAGTAGTAGCATTAGTGTTGTCGATAGTAGATAG

Protein Sequence

Location information (JBrowse)

Scaffold	Start	End	Strand
Scaffold01167	29774	35014	-

Gene family

Gene family	subfamily
--	--

KEGG pathway

KO	Enzyme	Enzyme ID	pathway	mapID
--	--	--	--	--

Gene Ontology

molecular_function
GO:0005515 protein binding

Pfam domain

Protein	Pfam accession	Pfam name	Alignment start	Alignment end	E-value
Glyur001167s00034011.1	PF12796.2	Ank_2	84	161	2.60E-09
Glyur001167s00034011.1	PF12796.2	Ank_2	171	244	1.00E-06
Glyur001167s00034011.1	PF12796.2	Ank_2	308	403	1.50E-19
Glyur001167s00034011.1	PF12796.2	Ank_2	448	526	3.70E-08
Glyur001167s00034011.1	PF12796.2	Ank_2	549	620	1.50E-17

Expression pattern

SRP053019

SRA Experiment	Description	TPM
SRR1783599	control	1.241
SRR1783600	control	1.261
SRR1783602	moderate drought stress	1.056
SRR1811619	moderate drought stress	1.014

DRP000996

SRA Experiment	Description	TPM
DRR006519	Root Summer glycyrrhizin high producing strain	2.733
DRR006520	Root Summer glycyrrhizin high producing strain	2.876
DRR006521	Root Winter glycyrrhizin high producing strain	0.179
DRR006522	Root Winter glycyrrhizin high producing strain	0.188
DRR006523	Root Summer glycyrrhizin low producing strain	1.289
DRR006524	Root Summer glycyrrhizin low producing strain	1.229
DRR006525	Leaf Summer glycyrrhizin high producing strain	0.788
DRR006526	Leaf Summer glycyrrhizin high producing strain	0.737

SRP065514

SRA Experiment	Description	TPM
SRR2867873	Salt Stress (root)	6.210
SRR2868004	Drought Stress (root)	2.944
SRR2967015	Control (root)	4.338

SRP215420

SRA Experiment	Description	TPM
SRR9715738	Leaf	1.338
SRR9715740	Leaf	0.068
SRR9715741	Leaf	0.486
SRR9715739	Root	0.891
SRR9715742	Root	1.177
SRR9715743	Root	1.170

SRP188776

SRA Experiment	Description	TPM
SRR8749027	MeJA induced 9h	4.504
SRR8749028	MeJA induced 9h	1.739
SRR8749029	MeJA induced 9h	1.648
SRR8749030	Uninduced	0.257
SRR8749031	Uninduced	0.118
SRR8749032	Uninduced	0.431

SRP175571

SRA Experiment	Description	TPM
SRR8400026	NaCl treatment - Root	3.497
SRR8400027	Control - Root	3.590