Gene detail information of Glyur001166s00031656 |
Functional Annotation
| Database | Orthologs | E value | Annotation |
|---|---|---|---|
| TAIR | AT5G57620.1 | 5.00E-23 | myb domain protein 36 |
| NR | XP_006604580.1 | 1.61E-63 | PREDICTED: transcription factor RAX2 [Glycine max] |
| Swissprot | tr|Q70YV7|RAX1_ARATH | 3.00E-26 | Transcription factor RAX1 |
| trEMBL | tr|I1NAB3|I1NAB3_SOYBN | 6.00E-64 | Uncharacterized protein {ECO:0000313|EnsemblPlants:GLYMA19G36830.1} |
Sequence
| Transcript Sequence |
|---|
| Protein Sequence |
|---|
Location information (JBrowse)
| Scaffold | Start | End | Strand |
|---|---|---|---|
| Scaffold01166 | 24788 | 26223 | - |
Gene family
| Gene family | subfamily |
|---|---|
| -- | -- |
KEGG pathway
| KO | Enzyme | Enzyme ID | pathway | mapID |
|---|---|---|---|---|
| -- | -- | -- | -- | -- |
Gene Ontology
|
Pfam domain
| Protein | Pfam accession | Pfam name | Alignment start | Alignment end | E-value |
|---|---|---|---|---|---|
| -- | -- | -- | -- | -- | -- |
Expression pattern
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR1783599 | control | 3.296 |
| SRR1783600 | control | 2.810 |
| SRR1783602 | moderate drought stress | 2.226 |
| SRR1811619 | moderate drought stress | 2.676 |
| SRA Experiment | Description | TPM |
|---|---|---|
| DRR006519 | Root Summer glycyrrhizin high producing strain | 0.831 |
| DRR006520 | Root Summer glycyrrhizin high producing strain | 1.038 |
| DRR006521 | Root Winter glycyrrhizin high producing strain | 0.857 |
| DRR006522 | Root Winter glycyrrhizin high producing strain | 0.989 |
| DRR006523 | Root Summer glycyrrhizin low producing strain | 2.135 |
| DRR006524 | Root Summer glycyrrhizin low producing strain | 3.333 |
| DRR006525 | Leaf Summer glycyrrhizin high producing strain | 0.314 |
| DRR006526 | Leaf Summer glycyrrhizin high producing strain | 0.222 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR2867873 | Salt Stress (root) | 15.223 |
| SRR2868004 | Drought Stress (root) | 19.347 |
| SRR2967015 | Control (root) | 22.533 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR9715738 | Leaf | 0.050 |
| SRR9715740 | Leaf | 0.000 |
| SRR9715741 | Leaf | 0.036 |
| SRR9715739 | Root | 0.000 |
| SRR9715742 | Root | 2.075 |
| SRR9715743 | Root | 1.067 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8749027 | MeJA induced 9h | 8.424 |
| SRR8749028 | MeJA induced 9h | 10.119 |
| SRR8749029 | MeJA induced 9h | 10.609 |
| SRR8749030 | Uninduced | 3.237 |
| SRR8749031 | Uninduced | 1.748 |
| SRR8749032 | Uninduced | 4.421 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8400026 | NaCl treatment - Root | 10.970 |
| SRR8400027 | Control - Root | 4.521 |