Gene detail

Gene detail information of Glyur001163s00025228

Functional Annotation

Database	Orthologs	E value	Annotation
TAIR	AT4G26180.1	2.00E-89	Mitochondrial substrate carrier family protein
NR	XP_004513092.1	3.75E-171	PREDICTED: mitochondrial substrate carrier family protein P-like [Cicer arietinum]
Swissprot	tr\|O04619\|ADNT1_ARATH	8.00E-41	Mitochondrial adenine nucleotide transporter ADNT1
trEMBL	tr\|I1KJU8\|I1KJU8_SOYBN	2.00E-170	Uncharacterized protein {ECO:0000313\|EnsemblPlants:GLYMA07G15430.1}

Sequence

Transcript Sequence

>Glyur001163s00025228.1
TGGGGGCTGATGGTTGGATTGGATGTCCAAAACATATATAAATGAGGCACGCAGCACGCAGCCAACAACACAACGAAACCAAATATTATAATTACAAACACACACGACACTACCTACCCATACGCATCGCATCAATTGAATTGCTCCATTGTTAATTATCAATTTATCATCGTGTTACTGGCCTCCAACATTCCTTCCAAGTTGTAGCAAGTTAGCAGCAACCATAGGATAGCAGCTAGCTCCTTCTCTTTTCCCTTTTTCCCTCTCTCTCTCTCTCTCTCTCTCTCTTTCAACTAAGTCTGAATAATGGCAAACACAAACGAGAGGGAAGGAGGAGAAGGGAAAGAGAAAGATAAAGTCGTGGCCATGGTCGATCTCATGCCCCTCTTTGCCAAGGAGCTTCTCGCCGGTGGCCTCGCCGGTGGCTTTGCCAAGACCGTCGTTGCNCCTCTTGAACGTGTCAAAATTCTCTTTCAGACTCGAAGAGNAGAGTTTCAGAGCACAGGACTATGTGGAACAACTACCAGAATTGCCAAAACGGAAGGCCTTTTGGGCCCTACCCTTGACCTTGTGGCAGGCTCACTGTCTGGAGGGACAGCTGTGCTTTTCACTTATCCCCTTGACTTAATTCGGACTAAGTTAGCTTATCAGATTGTTAGTCCAACCAAGTTGAAGGCTTCAGGGATGGTCAATAACGAACAAGTTTACAAAGGGATCCTTGATTGTCTTGCAAGAACCTATAAAGAGGGTGGCATTAGAGGTCTCTATAGGGGAGTAGCTCCAACACTCTTTGGAATCTTCCCATATGCGGGTCTGAAATTCTACTTCTATGAGGAAATGAAGCGCCATGTCCCTGAGGAGTACAGGAAAAGCATCATGGCCAAACTCACGTGTGGATCTGTAGCTGGTTTATTGGGTCAGACCTTCACATATCCTCTTGAAGTTGTAAGGAGGCAAATGCAGGTTCAAAAACTCGCGGCATCGCATGACGCCGAATTGAAGGGTACTCTGAAATCCGTTGTTTTGATTGCTCAAAAGCAAGGCTGGAGGCAACTGTTTTCAGGGCTGAGCATCAATTACATAAAGGTTGTTCCATCTGTGGCCATTGGGTTTACAGTTTATGATACTATGAAATCATGGCTGAGAGTCCCATCAAGAGATGAAGCCGCAGTTGAAGTGGAAACTGACAAAAGAATCAGCGAACCATCATCACAGTAATAATATAAGATGCTCCCCTTTGAATTTTAGCTCTCCTAACTCCTCACAGGCTTCAAATTGGCTTCTTGCTCTCATTCTATTCAAACTTTGTTCACACATTATTTTAGCTGCACATTGCATTCTTTCAAGTTGTACAGGGAGATACAGGTTATACATTCCATCTTTGAATAGTAGGACACAACATGTATTTCTATGCACCTTTGCCAAGGATCAATACCTTGACTCAGATCTCATTGATTTTCATCATTTAAGTAGAAAATAATATGTACTTGTTTTGATAGCACAAACTATGTACGTACAAATAAAGGATAAATTGCATTTTTTGAATGTGCAAATAGAGAGAATGATTTAGAAATGTTAA

Protein Sequence

Location information (JBrowse)

Scaffold	Start	End	Strand
Scaffold01163	83681	86465	-

Gene family

Gene family	subfamily
--	--

KEGG pathway

KO	Enzyme	Enzyme ID	pathway	mapID
--	--	--	--	--

Gene Ontology

biological_process

GO:0006810 transport

GO:0055085 transmembrane transport

cellular_component
GO:0005743 mitochondrial inner membrane

molecular_function
GO:0005215 transporter activity

Pfam domain

Protein	Pfam accession	Pfam name	Alignment start	Alignment end	E-value
Glyur001163s00025228.1	PF00153.22	Mito_carr	28	83	6.70E-10
Glyur001163s00025228.1	PF00153.22	Mito_carr	85	183	1.20E-25
Glyur001163s00025228.1	PF00153.22	Mito_carr	188	279	7.00E-21

Expression pattern

SRP053019

SRA Experiment	Description	TPM
SRR1783599	control	1.691
SRR1783600	control	1.709
SRR1783602	moderate drought stress	1.795
SRR1811619	moderate drought stress	1.874

DRP000996

SRA Experiment	Description	TPM
DRR006519	Root Summer glycyrrhizin high producing strain	3.505
DRR006520	Root Summer glycyrrhizin high producing strain	3.449
DRR006521	Root Winter glycyrrhizin high producing strain	8.529
DRR006522	Root Winter glycyrrhizin high producing strain	8.256
DRR006523	Root Summer glycyrrhizin low producing strain	4.498
DRR006524	Root Summer glycyrrhizin low producing strain	4.507
DRR006525	Leaf Summer glycyrrhizin high producing strain	7.807
DRR006526	Leaf Summer glycyrrhizin high producing strain	7.586

SRP065514

SRA Experiment	Description	TPM
SRR2867873	Salt Stress (root)	14.202
SRR2868004	Drought Stress (root)	11.600
SRR2967015	Control (root)	12.243

SRP215420

SRA Experiment	Description	TPM
SRR9715738	Leaf	5.645
SRR9715740	Leaf	4.123
SRR9715741	Leaf	9.146
SRR9715739	Root	0.904
SRR9715742	Root	2.447
SRR9715743	Root	2.032

SRP188776

SRA Experiment	Description	TPM
SRR8749027	MeJA induced 9h	3.797
SRR8749028	MeJA induced 9h	4.391
SRR8749029	MeJA induced 9h	3.704
SRR8749030	Uninduced	14.801
SRR8749031	Uninduced	17.466
SRR8749032	Uninduced	12.041

SRP175571

SRA Experiment	Description	TPM
SRR8400026	NaCl treatment - Root	6.993
SRR8400027	Control - Root	7.595