Gene detail information of Glyur001161s00035399 |
Functional Annotation
| Database | Orthologs | E value | Annotation |
|---|---|---|---|
| TAIR | AT4G17940.1 | 1.00E-06 | Tetratricopeptide repeat (TPR)-like superfamily protein |
| NR | XP_003517037.2 | 2.89E-18 | PREDICTED: uncharacterized protein LOC100788211 [Glycine max] |
| trEMBL | tr|K7K1A4|K7K1A4_SOYBN | 4.00E-19 | Uncharacterized protein {ECO:0000313|EnsemblPlants:GLYMA01G02110.3} |
Sequence
| Transcript Sequence |
|---|
| Protein Sequence |
|---|
Location information (JBrowse)
| Scaffold | Start | End | Strand |
|---|---|---|---|
| Scaffold01161 | 876 | 1205 | - |
Gene family
| Gene family | subfamily |
|---|---|
| -- | -- |
KEGG pathway
| KO | Enzyme | Enzyme ID | pathway | mapID |
|---|---|---|---|---|
| -- | -- | -- | -- | -- |
Gene Ontology
| Not hits found. |
Pfam domain
| Protein | Pfam accession | Pfam name | Alignment start | Alignment end | E-value |
|---|---|---|---|---|---|
| -- | -- | -- | -- | -- | -- |
Expression pattern
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR1783599 | control | 2.803 |
| SRR1783600 | control | 2.335 |
| SRR1783602 | moderate drought stress | 4.396 |
| SRR1811619 | moderate drought stress | 2.912 |
| SRA Experiment | Description | TPM |
|---|---|---|
| DRR006519 | Root Summer glycyrrhizin high producing strain | 3.119 |
| DRR006520 | Root Summer glycyrrhizin high producing strain | 2.926 |
| DRR006521 | Root Winter glycyrrhizin high producing strain | 4.546 |
| DRR006522 | Root Winter glycyrrhizin high producing strain | 3.780 |
| DRR006523 | Root Summer glycyrrhizin low producing strain | 2.733 |
| DRR006524 | Root Summer glycyrrhizin low producing strain | 2.161 |
| DRR006525 | Leaf Summer glycyrrhizin high producing strain | 0.563 |
| DRR006526 | Leaf Summer glycyrrhizin high producing strain | 0.281 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR2867873 | Salt Stress (root) | 2.048 |
| SRR2868004 | Drought Stress (root) | 1.237 |
| SRR2967015 | Control (root) | 1.576 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR9715738 | Leaf | 0.000 |
| SRR9715740 | Leaf | 0.000 |
| SRR9715741 | Leaf | 0.000 |
| SRR9715739 | Root | 0.000 |
| SRR9715742 | Root | 0.000 |
| SRR9715743 | Root | 0.000 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8749027 | MeJA induced 9h | 2.063 |
| SRR8749028 | MeJA induced 9h | 3.368 |
| SRR8749029 | MeJA induced 9h | 2.807 |
| SRR8749030 | Uninduced | 3.142 |
| SRR8749031 | Uninduced | 0.969 |
| SRR8749032 | Uninduced | 2.566 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8400026 | NaCl treatment - Root | 0.000 |
| SRR8400027 | Control - Root | 0.021 |