Gene detail information of Glyur001158s00022952 |
Functional Annotation
| Database | Orthologs | E value | Annotation |
|---|---|---|---|
| TAIR | AT1G62310.1 | 8.00E-149 | transcription factor jumonji (jmjC) domain-containing protein |
| NR | XP_006584086.1 | 0 | PREDICTED: uncharacterized protein LOC100797860 [Glycine max] |
| Swissprot | tr|Q9SSE9|JMJ25_ARATH | 6.00E-110 | Lysine-specific demethylase JMJ25 |
| trEMBL | tr|K7L3Y3|K7L3Y3_SOYBN | 0 | Uncharacterized protein {ECO:0000313|EnsemblPlants:GLYMA07G39310.2} |
Sequence
| Transcript Sequence |
|---|
| Protein Sequence |
|---|
Location information (JBrowse)
| Scaffold | Start | End | Strand |
|---|---|---|---|
| Scaffold01158 | 48874 | 54577 | + |
Gene family
| Gene family | subfamily |
|---|---|
| -- | -- |
KEGG pathway
| KO | Enzyme | Enzyme ID | pathway | mapID |
|---|---|---|---|---|
| -- | -- | -- | -- | -- |
Gene Ontology
| Not hits found. |
Pfam domain
| Protein | Pfam accession | Pfam name | Alignment start | Alignment end | E-value |
|---|---|---|---|---|---|
| -- | -- | -- | -- | -- | -- |
Expression pattern
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR1783599 | control | 1.081 |
| SRR1783600 | control | 1.089 |
| SRR1783602 | moderate drought stress | 0.762 |
| SRR1811619 | moderate drought stress | 0.745 |
| SRA Experiment | Description | TPM |
|---|---|---|
| DRR006519 | Root Summer glycyrrhizin high producing strain | 2.801 |
| DRR006520 | Root Summer glycyrrhizin high producing strain | 2.791 |
| DRR006521 | Root Winter glycyrrhizin high producing strain | 7.085 |
| DRR006522 | Root Winter glycyrrhizin high producing strain | 6.848 |
| DRR006523 | Root Summer glycyrrhizin low producing strain | 1.914 |
| DRR006524 | Root Summer glycyrrhizin low producing strain | 1.824 |
| DRR006525 | Leaf Summer glycyrrhizin high producing strain | 10.686 |
| DRR006526 | Leaf Summer glycyrrhizin high producing strain | 10.582 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR2867873 | Salt Stress (root) | 5.883 |
| SRR2868004 | Drought Stress (root) | 7.567 |
| SRR2967015 | Control (root) | 5.206 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR9715738 | Leaf | 10.034 |
| SRR9715740 | Leaf | 8.461 |
| SRR9715741 | Leaf | 8.053 |
| SRR9715739 | Root | 0.293 |
| SRR9715742 | Root | 1.348 |
| SRR9715743 | Root | 1.188 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8749027 | MeJA induced 9h | 4.388 |
| SRR8749028 | MeJA induced 9h | 7.192 |
| SRR8749029 | MeJA induced 9h | 3.838 |
| SRR8749030 | Uninduced | 5.258 |
| SRR8749031 | Uninduced | 5.161 |
| SRR8749032 | Uninduced | 1.982 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8400026 | NaCl treatment - Root | 5.247 |
| SRR8400027 | Control - Root | 5.762 |